Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272998	Mesdc1	mesoderm development candidate 1	7		80889
Human Homolog	MESDC1[mesoderm development candidate 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGTGGCGG (5) 6.5 0.0065 P8 Cb GC TACTGGAGTA 6.5 0.0065 P8 Cb GC CAGGGTAAAA (3) 3.3 0.0033 P8 Cb GC GTGTGAAAAA (2) 1.6 0.0016 Cb medulloblastoma TACTGGAGTA 6.9 0.0069 Cb medulloblastoma AGGGTGGCGG (5) 4.6 0.0046 Cb medulloblastoma CAGGGTAAAA (3) 2.3 0.0023 P8 GC+1d culture TACTGGAGTA 4.6 0.0046 P8 GC+1d culture CGCGCTTCCT (4) 3.4 0.0034 P8 GC+1d culture GTGTGAAAAA (2) 2.3 0.0023 P8 GC+1d culture AGGGTGGCGG (5) 1.1 0.0011 P8 GC+1d culture CCGCCTGCCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TACTGGAGTA 5.9 0.0059 P8 GC+SHH+1d culture AGGGTGGCGG (5) 1.2 0.0012 P8 GC+SHH+1d culture CAGGGTAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CGCGCTTCCT (4) 1.2 0.0012 3T3 fibroblasts AGGGTGGCGG (5) 14 0.014 3T3 fibroblasts CGCGCTTCCT (4) 3.5 0.0035 3T3 fibroblasts TACTGGAGTA 3.5 0.0035 P1 cortex CGCGCTTCCT (4) 4.5 0.0045 Hypothalamus AGGGTGGCGG (5) 1.8 0.0018 Hypothalamus CGCGCTTCCT (4) 1.8 0.0018 Hypothalamus GTGTGAAAAA (2) 1.8 0.0018 Hypothalamus TACTGGAGTA 1.8 0.0018 E12.5 retina TACTGGAGTA 9.4 0.0094 E12.5 retina GTGTGAAAAA (2) 3.8 0.0038 E12.5 retina CGCGCTTCCT (4) 1.9 0.0019 E14.5 retina AGGGTGGCGG (5) 18.2 0.0182 E14.5 retina TACTGGAGTA 3.6 0.0036 E14.5 retina GCAGGAGTCC (3) 1.8 0.0018 E14.5 retina GTGTGAAAAA (2) 1.8 0.0018 E16.5 retina AGGGTGGCGG (5) 9.1 0.0091 E16.5 retina TACTGGAGTA 5.4 0.0054 E18.5 retina AGGGTGGCGG (5) 9.1 0.0091 E18.5 retina TACTGGAGTA 5.5 0.0055 E18.5 retina CAGGGTAAAA (3) 1.8 0.0018 E18.5 retina GTGTGAAAAA (2) 1.8 0.0018 P0.5 retina TACTGGAGTA 5.9 0.0059 P0.5 retina CGCGCTTCCT (4) 3.9 0.0039 P0.5 retina AGGGTGGCGG (5) 2 0.002 P2.5 retina AGGGTGGCGG (5) 1.8 0.0018 P2.5 retina CCGCCTGCCA (2) 1.8 0.0018 P2.5 retina CGCGCTTCCT (4) 1.8 0.0018 P2.5 retina TACTGGAGTA 1.8 0.0018 P4.5 retina AGGGTGGCGG (5) 2 0.002 P4.5 retina CAGGGTAAAA (3) 2 0.002 P4.5 retina CGCGCTTCCT (4) 2 0.002 P6.5 retina CAGGGTAAAA (3) 1.7 0.0017 P6.5 retina GCAGGAGTCC (3) 1.7 0.0017 P10.5 crx- retina TACTGGAGTA 5.6 0.0056 P10.5 crx- retina AGGGTGGCGG (5) 3.7 0.0037 P10.5 crx+ retina AGGGTGGCGG (5) 3.8 0.0038 P10.5 crx+ retina CAGGGTAAAA (3) 1.9 0.0019 P10.5 crx+ retina CGCGCTTCCT (4) 1.9 0.0019 Adult retinal CCGCCTGCCA (2) 1.9 0.0019 Adult retinal CGCGCTTCCT (4) 1.9 0.0019 Adult retinal GCAGGAGTCC (3) 1.9 0.0019 Adult retinal TACTGGAGTA 1.9 0.0019 ONL TACTGGAGTA 3.8 0.0038