Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273087
Pcp4l1
Purkinje cell protein 4-like 1
1
66425
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
CAAAAATAAA (
9
)
32.6
0.0326
P8 Cb GC
TTTAATAATG
(
3
)
3.3
0.0033
P8 Cb GC
CCTTTAGTCC (
27
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CAAAAATAAA (
9
)
69.4
0.0694
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
CAAAAATAAA (
9
)
34.2
0.0342
P8 GC+1d culture
CCTTTAGTCC (
27
)
10.3
0.0103
P8 GC+SHH+1d culture
CAAAAATAAA (
9
)
65.6
0.0656
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CCTTTAGTCC (
27
)
3.5
0.0035
3T3 fibroblasts
CAAAAATAAA (
9
)
3.5
0.0035
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
CCTTTAGTCC (
27
)
9.9
0.0099
E15 cortex
CAAAAATAAA (
9
)
4.9
0.0049
P1 cortex
CAAAAATAAA (
9
)
36.4
0.0364
P1 cortex
CCTTTAGTCC (
27
)
27.3
0.0273
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
Hypothalamus
CAAAAATAAA (
9
)
67
0.067
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
TTTAATAATG
(
3
)
7.2
0.0072
Hypothalamus
CCTTTAGTCC (
27
)
3.6
0.0036
E12.5 retina
CAAAAATAAA (
9
)
223.4
0.2234
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
CCTTTAGTCC (
27
)
5.6
0.0056
E14.5 retina
CAAAAATAAA (
9
)
153
0.153
E14.5 retina
CCTTTAGTCC (
27
)
14.6
0.0146
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
TTTAATAATG
(
3
)
1.8
0.0018
E16.5 retina
CAAAAATAAA (
9
)
199.2
0.1992
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CCTTTAGTCC (
27
)
5.4
0.0054
E18.5 retina
CAAAAATAAA (
9
)
391.1
0.3911
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
CCTTTAGTCC (
27
)
5.5
0.0055
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
CAAAAATAAA (
9
)
62.8
0.0628
P0.5 retina
CCTTTAGTCC (
27
)
7.9
0.0079
P0.5 retina
TTTAATAATG
(
3
)
2
0.002
P2.5 retina
CAAAAATAAA (
9
)
253.4
0.2534
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
CCTTTAGTCC (
27
)
5.3
0.0053
P2.5 retina
TTTAATAATG
(
3
)
3.5
0.0035
P4.5 retina
CAAAAATAAA (
9
)
281.4
0.2814
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
CCTTTAGTCC (
27
)
4
0.004
P4.5 retina
TTTAATAATG
(
3
)
2
0.002
P6.5 retina
CAAAAATAAA (
9
)
161.7
0.1617
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
CCTTTAGTCC (
27
)
3.3
0.0033
P6.5 retina
TTTAATAATG
(
3
)
3.3
0.0033
P10.5 crx- retina
CAAAAATAAA (
9
)
96.6
0.0966
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
TTTAATAATG
(
3
)
7.4
0.0074
P10.5 crx- retina
CCTTTAGTCC (
27
)
1.9
0.0019
P10.5 crx+ retina
CAAAAATAAA (
9
)
126.9
0.1269
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
CCTTTAGTCC (
27
)
5.8
0.0058
P10.5 crx+ retina
TTTAATAATG
(
3
)
3.8
0.0038
Adult retinal
CAAAAATAAA (
9
)
81.5
0.0815
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
CCTTTAGTCC (
27
)
3.7
0.0037
ONL
CAAAAATAAA (
9
)
105.3
0.1053
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
CCTTTAGTCC (
27
)
7.7
0.0077
ONL
TTTAATAATG
(
3
)
1.9
0.0019