Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273174	Stam	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	2		20844
Gene Ontology	intracellular protein transport | protein binding
Human Homolog	STAM[signal transducing adaptor molecule (SH3 domain and ITAM motif) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTCCAGT (5) 156.6 0.1566 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC GAGAATTTTC (5) 4.9 0.0049 P8 Cb GC AGACAAAAAA (18) 3.3 0.0033 P8 Cb GC AGGACTGTAG (3) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma ATTCTCCAGT (5) 60.1 0.0601 Cb medulloblastoma AGACAAAAAA (18) 13.9 0.0139 Cb medulloblastoma TGAGAAAAAA (3) 4.6 0.0046 Cb medulloblastoma GAGAATTTTC (5) 2.3 0.0023 P8 GC+1d culture ATTCTCCAGT (5) 134.7 0.1347 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture AGACAAAAAA (18) 6.8 0.0068 P8 GC+1d culture GAGAATTTTC (5) 4.6 0.0046 P8 GC+1d culture TTCTTTCCAG (4) 2.3 0.0023 P8 GC+1d culture AAGGTATCAA 1.1 0.0011 P8 GC+SHH+1d culture ATTCTCCAGT (5) 162.8 0.1628 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture AGACAAAAAA (18) 7 0.007 P8 GC+SHH+1d culture TTCTTTCCAG (4) 2.3 0.0023 3T3 fibroblasts ATTCTCCAGT (5) 91.1 0.0911 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts AGGACTGTAG (3) 3.5 0.0035 E15 cortex ATTCTCCAGT (5) 49.5 0.0495 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex GAGAATTTTC (5) 4.9 0.0049 E15 cortex TGCATCACCT 4.9 0.0049 P1 cortex ATTCTCCAGT (5) 90.9 0.0909 P1 cortex AGACAAAAAA (18) 18.2 0.0182 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TGCATCACCT 4.5 0.0045 P1 cortex TTCTTTCCAG (4) 4.5 0.0045 Hypothalamus ATTCTCCAGT (5) 65.2 0.0652 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus AGACAAAAAA (18) 10.9 0.0109 Hypothalamus GAGAATTTTC (5) 3.6 0.0036 Hypothalamus TGAGAAAAAA (3) 1.8 0.0018 E12.5 retina ATTCTCCAGT (5) 322.9 0.3229 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina AGACAAAAAA (18) 9.4 0.0094 E14.5 retina ATTCTCCAGT (5) 229.6 0.2296 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina AGACAAAAAA (18) 5.5 0.0055 E14.5 retina TGCATCACCT 1.8 0.0018 E16.5 retina ATTCTCCAGT (5) 228.2 0.2282 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina AGACAAAAAA (18) 1.8 0.0018 E16.5 retina TGCATCACCT 1.8 0.0018 E16.5 retina TTCTTTCCAG (4) 1.8 0.0018 E18.5 retina ATTCTCCAGT (5) 227.4 0.2274 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina AGACAAAAAA (18) 9.1 0.0091 E18.5 retina GAGAATTTTC (5) 5.5 0.0055 E18.5 retina AAGGTATCAA 1.8 0.0018 E18.5 retina TTCTTTCCAG (4) 1.8 0.0018 P0.5 retina ATTCTCCAGT (5) 172.7 0.1727 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina AGACAAAAAA (18) 2 0.002 P0.5 retina GAGAATTTTC (5) 2 0.002 P2.5 retina ATTCTCCAGT (5) 140.8 0.1408 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina AGACAAAAAA (18) 7 0.007 P2.5 retina AGGACTGTAG (3) 1.8 0.0018 P4.5 retina ATTCTCCAGT (5) 182.3 0.1823 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina AGACAAAAAA (18) 7.9 0.0079 P4.5 retina AAGGTATCAA 4 0.004 P4.5 retina TGAGAAAAAA (3) 2 0.002 P6.5 retina ATTCTCCAGT (5) 100 0.1 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina AGACAAAAAA (18) 15 0.015 P6.5 retina GAGAATTTTC (5) 1.7 0.0017 P10.5 crx- retina ATTCTCCAGT (5) 94.7 0.0947 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina AGACAAAAAA (18) 3.7 0.0037 P10.5 crx- retina AGGACTGTAG (3) 1.9 0.0019 P10.5 crx+ retina ATTCTCCAGT (5) 61.5 0.0615 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina AGACAAAAAA (18) 11.5 0.0115 P10.5 crx+ retina GAGAATTTTC (5) 1.9 0.0019 Adult retinal ATTCTCCAGT (5) 55.5 0.0555 Adult retinal AGACAAAAAA (18) 38.9 0.0389 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TTCTTTCCAG (4) 3.7 0.0037 Adult retinal GAGAATTTTC (5) 1.9 0.0019 Adult retinal TGCATCACCT 1.9 0.0019 ONL AGACAAAAAA (18) 57.5 0.0575 ONL ATTCTCCAGT (5) 49.8 0.0498 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TGAGAAAAAA (3) 1.9 0.0019