Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273217	Polr2b	polymerase (RNA) II (DNA directed) polypeptide B	5		231329
Gene Ontology	DNA binding | DNA-directed RNA polymerase activity | nucleus | transcription | transferase activity
Human Homolog	POLR2B[polymerase (RNA) II (DNA directed) polypeptide B, 140kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCTTTAAA (2) 19.6 0.0196 P8 Cb GC TGCTTTTTTC (2) 6.5 0.0065 P8 Cb GC GTCAGATACT (2) 1.6 0.0016 P8 Cb GC TCTGTAATCC (7) 1.6 0.0016 P8 Cb GC TCTGTAATCT (8) 1.6 0.0016 Cb medulloblastoma TGCTTTTTTC (2) 16.2 0.0162 Cb medulloblastoma TAGCTTTAAA (2) 6.9 0.0069 Cb medulloblastoma TCTGTAATCC (7) 6.9 0.0069 Cb medulloblastoma TCTGTAATCT (8) 2.3 0.0023 P8 GC+1d culture TAGCTTTAAA (2) 34.2 0.0342 P8 GC+1d culture TGCTTTTTTC (2) 5.7 0.0057 P8 GC+1d culture AGCCTCTGTA (2) 1.1 0.0011 P8 GC+1d culture TCTGTAATCC (7) 1.1 0.0011 P8 GC+1d culture TCTGTAATCT (8) 1.1 0.0011 P8 GC+SHH+1d culture TAGCTTTAAA (2) 36.3 0.0363 P8 GC+SHH+1d culture TGCTTTTTTC (2) 14.1 0.0141 P8 GC+SHH+1d culture TGCTTTTTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture GTCAGATACT (2) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TAGCTTTAAA (2) 7 0.007 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCTTTTTTC (2) 4.9 0.0049 E15 cortex TGCTTTTTTT (7) 4.9 0.0049 P1 cortex TGCTTTTTTC (2) 9.1 0.0091 P1 cortex TCTGTAATCC (7) 4.5 0.0045 Hypothalamus TAGCTTTAAA (2) 16.3 0.0163 Hypothalamus TGCTTTTTTC (2) 3.6 0.0036 Hypothalamus CTGGGCCAAA (3) 1.8 0.0018 Hypothalamus TTTAAGAATT (5) 1.8 0.0018 E12.5 retina GTCAGATACT (2) 1.9 0.0019 E12.5 retina TAGCTTTAAA (2) 1.9 0.0019 E12.5 retina TGCTTTTTTC (2) 1.9 0.0019 E14.5 retina TGCTTTTTTC (2) 5.5 0.0055 E14.5 retina TAGCTTTAAA (2) 3.6 0.0036 E14.5 retina TCTGTAATCT (8) 1.8 0.0018 E14.5 retina TGCTTTTTTT (7) 1.8 0.0018 E16.5 retina TGCTTTTTTC (2) 5.4 0.0054 E16.5 retina TCTGTAATCC (7) 1.8 0.0018 E16.5 retina TCTGTAATCT (8) 1.8 0.0018 E18.5 retina TGCTTTTTTC (2) 12.7 0.0127 E18.5 retina TCTGTAATCC (7) 1.8 0.0018 E18.5 retina TGCTTTTTTT (7) 1.8 0.0018 E18.5 retina TTTAAGAATT (5) 1.8 0.0018 P0.5 retina TAGCTTTAAA (2) 9.8 0.0098 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGCTTTTTTC (2) 3.9 0.0039 P2.5 retina TGCTTTTTTC (2) 7 0.007 P2.5 retina TAGCTTTAAA (2) 3.5 0.0035 P2.5 retina CTGGGCCAAA (3) 1.8 0.0018 P2.5 retina GTCAGATACT (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TGCTTTTTTC (2) 15.9 0.0159 P4.5 retina TAGCTTTAAA (2) 5.9 0.0059 P4.5 retina AGCCTCTGTA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGCTTTTTTT (7) 2 0.002 P6.5 retina TGCTTTTTTC (2) 15 0.015 P6.5 retina TAGCTTTAAA (2) 11.7 0.0117 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCTGTAATCC (7) 3.3 0.0033 P6.5 retina CTGGGCCAAA (3) 1.7 0.0017 P10.5 crx- retina TAGCTTTAAA (2) 9.3 0.0093 P10.5 crx- retina TCTGTAATCT (8) 3.7 0.0037 P10.5 crx- retina TGCTTTTTTC (2) 3.7 0.0037 P10.5 crx- retina GTCAGATACT (2) 1.9 0.0019 P10.5 crx- retina TTTAAGAATT (5) 1.9 0.0019 P10.5 crx+ retina TGCTTTTTTC (2) 13.5 0.0135 P10.5 crx+ retina TAGCTTTAAA (2) 9.6 0.0096 P10.5 crx+ retina TTTAAGAATT (5) 1.9 0.0019 Adult retinal TAGCTTTAAA (2) 5.6 0.0056 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCTGTAATCC (7) 1.9 0.0019 Adult retinal TGCTTTTTTC (2) 1.9 0.0019 Adult retinal TTTAAGAATT (5) 1.9 0.0019 ONL TTTAAGAATT (5) 21.1 0.0211 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TCTGTAATCC (7) 3.8 0.0038 ONL TGCTTTTTTC (2) 3.8 0.0038 ONL TAGCTTTAAA (2) 1.9 0.0019 ONL TCTGTAATCT (8) 1.9 0.0019