Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273496
Zfr
zinc finger RNA binding protein
15
22763
Mm.273496
C920030H05Rik
RIKEN cDNA C920030H05 gene
15
319369
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
TGTGTGTGCT
(
8
)
1.6
0.0016
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
CTTATGTCTT
(
4
)
2.3
0.0023
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
CTTATGTCTT
(
4
)
2.3
0.0023
P8 GC+1d culture
GAAGAACCAA
(
2
)
1.1
0.0011
P8 GC+1d culture
TAATGACTTA
(
2
)
1.1
0.0011
P8 GC+1d culture
TTGGATGGCC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
CTTATGTCTT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAGAACCAA
(
2
)
1.2
0.0012
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
3T3 fibroblasts
CTTATGTCTT
(
4
)
3.5
0.0035
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
P1 cortex
CTTATGTCTT
(
4
)
4.5
0.0045
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
CTTATGTCTT
(
4
)
7.2
0.0072
Hypothalamus
TTGGATGGCC
(
4
)
3.6
0.0036
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
GAAGAACCAA
(
2
)
3.8
0.0038
E12.5 retina
CTTATGTCTT
(
4
)
1.9
0.0019
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E14.5 retina
CTTATGTCTT
(
4
)
1.8
0.0018
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
CTTATGTCTT
(
4
)
5.4
0.0054
E16.5 retina
ACATTTTTGT
(
4
)
1.8
0.0018
E16.5 retina
TGTGTGTGCT
(
8
)
1.8
0.0018
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
E18.5 retina
TAATGACTTA
(
2
)
3.6
0.0036
E18.5 retina
CTTATGTCTT
(
4
)
1.8
0.0018
E18.5 retina
GAAGAACCAA
(
2
)
1.8
0.0018
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
CTTATGTCTT
(
4
)
2
0.002
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
CTTATGTCTT
(
4
)
5.3
0.0053
P2.5 retina
GAAGAACCAA
(
2
)
1.8
0.0018
P2.5 retina
TTGGATGGCC
(
4
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
TTGGATGGCC
(
4
)
4
0.004
P4.5 retina
ACATTTTTGT
(
4
)
2
0.002
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
CTTATGTCTT
(
4
)
3.3
0.0033
P6.5 retina
TTGGATGGCC
(
4
)
3.3
0.0033
P6.5 retina
GAAGAACCAA
(
2
)
1.7
0.0017
P6.5 retina
TGTGTGTGCT
(
8
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
CTTATGTCTT
(
4
)
7.4
0.0074
P10.5 crx- retina
GAAGAACCAA
(
2
)
1.9
0.0019
P10.5 crx- retina
TAATGACTTA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
CTTATGTCTT
(
4
)
7.7
0.0077
P10.5 crx+ retina
GAAGAACCAA
(
2
)
5.8
0.0058
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
TTGGATGGCC
(
4
)
1.9
0.0019
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
CTTATGTCTT
(
4
)
3.7
0.0037
Adult retinal
ACATTTTTGT
(
4
)
1.9
0.0019
Adult retinal
TTGGATGGCC
(
4
)
1.9
0.0019
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
CTTATGTCTT
(
4
)
5.7
0.0057
ONL
GAAGAACCAA
(
2
)
1.9
0.0019
ONL
TGTGTGTGCT
(
8
)
1.9
0.0019
ONL
TTGGATGGCC
(
4
)
1.9
0.0019
