Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27372
Ureb1
upstream regulatory element binding protein 1e
X
59026
Mm.27372
C430014N20Rik
RIKEN cDNA C430014N20 gene
X
237117
Mm.27372
C80292
expressed sequence C80292
X
97602
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTTAAGAAG
(
3
)
6.5
0.0065
P8 Cb GC
CTACTATTGG
(
3
)
3.3
0.0033
Cb medulloblastoma
TTGTCACATC
(
4
)
2.3
0.0023
P8 GC+1d culture
TTGTCACATC
(
4
)
4.6
0.0046
P8 GC+1d culture
TGTTAAGAAG
(
3
)
3.4
0.0034
P8 GC+1d culture
CTACTATTGG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGTCACATC
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TGTTAAGAAG
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
CTACTATTGG
(
3
)
1.2
0.0012
3T3 fibroblasts
CTACTATTGG
(
3
)
3.5
0.0035
3T3 fibroblasts
TGTTAAGAAG
(
3
)
3.5
0.0035
E15 cortex
TGTTAAGAAG
(
3
)
9.9
0.0099
E15 cortex
TTGTCACATC
(
4
)
4.9
0.0049
P1 cortex
TGTTAAGAAG
(
3
)
22.7
0.0227
P1 cortex
TTGTCACATC
(
4
)
4.5
0.0045
Hypothalamus
TTGTCACATC
(
4
)
18.1
0.0181
Hypothalamus
TGTTAAGAAG
(
3
)
7.2
0.0072
Hypothalamus
GAAAAGGGAG
(
3
)
1.8
0.0018
E12.5 retina
CTACTATTGG
(
3
)
1.9
0.0019
E12.5 retina
GAAAAGGGAG
(
3
)
1.9
0.0019
E12.5 retina
TTGTCACATC
(
4
)
1.9
0.0019
E14.5 retina
TTGTCACATC
(
4
)
5.5
0.0055
E16.5 retina
TTGTCACATC
(
4
)
7.2
0.0072
E18.5 retina
TTGTCACATC
(
4
)
1.8
0.0018
P0.5 retina
CTACTATTGG
(
3
)
5.9
0.0059
P0.5 retina
TGTTAAGAAG
(
3
)
5.9
0.0059
P0.5 retina
TTGTCACATC
(
4
)
2
0.002
P2.5 retina
CTACTATTGG
(
3
)
3.5
0.0035
P2.5 retina
TGTTAAGAAG
(
3
)
1.8
0.0018
P4.5 retina
TACCCACACT
(
3
)
5.9
0.0059
P4.5 retina
TGTTAAGAAG
(
3
)
2
0.002
P4.5 retina
TTGTCACATC
(
4
)
2
0.002
P6.5 retina
TACCCACACT
(
3
)
3.3
0.0033
P6.5 retina
TGTTAAGAAG
(
3
)
3.3
0.0033
P6.5 retina
CTACTATTGG
(
3
)
1.7
0.0017
P6.5 retina
TTGTCACATC
(
4
)
1.7
0.0017
P10.5 crx- retina
TTGTCACATC
(
4
)
13
0.013
P10.5 crx- retina
TACCCACACT
(
3
)
3.7
0.0037
P10.5 crx- retina
TGTTAAGAAG
(
3
)
3.7
0.0037
P10.5 crx+ retina
TACCCACACT
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGTTAAGAAG
(
3
)
1.9
0.0019
Adult retinal
TGTTAAGAAG
(
3
)
5.6
0.0056
Adult retinal
TTGTCACATC
(
4
)
5.6
0.0056
Adult retinal
CTACTATTGG
(
3
)
1.9
0.0019
ONL
TGTTAAGAAG
(
3
)
3.8
0.0038
ONL
CTACTATTGG
(
3
)
1.9
0.0019
