Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273768	Klhl7	kelch-like 7 (Drosophila)	5	5 12.0 cM	52323
Mm.273768	Gabarapl2	gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2	8		93739
Gene Ontology	actin binding | ATP binding | cytoskeleton | Golgi apparatus | Golgi apparatus | Golgi membrane | intracellular protein transport | intra-Golgi transport | protein binding | protein binding | protein transport | protein transporter activity | transport
Human Homolog	GABARAPL2[GABA(A) receptor-associated protein-like 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTCATA (21) 22.8 0.0228 P8 Cb GC TGTGTTTTGG (5) 17.9 0.0179 P8 Cb GC TTAAACTGTC (3) 14.7 0.0147 P8 Cb GC GGAGCCCCTC (6) 9.8 0.0098 P8 Cb GC GGATGGTGGA (6) 3.3 0.0033 Cb medulloblastoma GTGGCTCATA (21) 23.1 0.0231 Cb medulloblastoma TGTGTTTTGG (5) 13.9 0.0139 Cb medulloblastoma TTAAACTGTC (3) 11.6 0.0116 Cb medulloblastoma GGAGCCCCTC (6) 9.2 0.0092 Cb medulloblastoma CTTGAATCTA (3) 6.9 0.0069 Cb medulloblastoma AAAAAAATTA (6) 2.3 0.0023 Cb medulloblastoma AACACTTGGA (7) 2.3 0.0023 P8 GC+1d culture GTGGCTCATA (21) 26.3 0.0263 P8 GC+1d culture TGTGTTTTGG (5) 21.7 0.0217 P8 GC+1d culture TTAAACTGTC (3) 9.1 0.0091 P8 GC+1d culture GGAGCCCCTC (6) 4.6 0.0046 P8 GC+1d culture AAAAAAATTA (6) 1.1 0.0011 P8 GC+1d culture TTCTGCTAGG (4) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTCATA (21) 24.6 0.0246 P8 GC+SHH+1d culture TTAAACTGTC (3) 15.2 0.0152 P8 GC+SHH+1d culture TGTGTTTTGG (5) 14.1 0.0141 P8 GC+SHH+1d culture GGAGCCCCTC (6) 2.3 0.0023 P8 GC+SHH+1d culture CTTGAATCTA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCTGCTAGG (4) 1.2 0.0012 3T3 fibroblasts GTGGCTCATA (21) 24.5 0.0245 E15 cortex GTGGCTCATA (21) 39.6 0.0396 E15 cortex GGAGCCCCTC (6) 9.9 0.0099 E15 cortex GGATGGTGGA (6) 4.9 0.0049 E15 cortex TGTGTTTTGG (5) 4.9 0.0049 E15 cortex TTAAACTGTC (3) 4.9 0.0049 P1 cortex GTGGCTCATA (21) 27.3 0.0273 P1 cortex GGAGCCCCTC (6) 9.1 0.0091 P1 cortex AAAAAAATTA (6) 4.5 0.0045 Hypothalamus GTGGCTCATA (21) 30.8 0.0308 Hypothalamus TTAAACTGTC (3) 7.2 0.0072 Hypothalamus TGTGTTTTGG (5) 3.6 0.0036 Hypothalamus AACACTTGGA (7) 1.8 0.0018 Hypothalamus CTTGAATCTA (3) 1.8 0.0018 E12.5 retina GTGGCTCATA (21) 82.6 0.0826 E12.5 retina TGTGTTTTGG (5) 7.5 0.0075 E12.5 retina TTAAACTGTC (3) 7.5 0.0075 E12.5 retina GGAGCCCCTC (6) 5.6 0.0056 E12.5 retina AACACTTGGA (7) 1.9 0.0019 E12.5 retina TTCTGCTAGG (4) 1.9 0.0019 E14.5 retina GTGGCTCATA (21) 49.2 0.0492 E14.5 retina TTAAACTGTC (3) 18.2 0.0182 E14.5 retina AACACTTGGA (7) 5.5 0.0055 E14.5 retina GGAGCCCCTC (6) 3.6 0.0036 E14.5 retina AAAAAAATTA (6) 1.8 0.0018 E14.5 retina CTTGAATCTA (3) 1.8 0.0018 E16.5 retina GTGGCTCATA (21) 34.4 0.0344 E16.5 retina TTAAACTGTC (3) 10.9 0.0109 E16.5 retina GGAGCCCCTC (6) 3.6 0.0036 E16.5 retina GGATGGTGGA (6) 1.8 0.0018 E16.5 retina TGTGTTTTGG (5) 1.8 0.0018 E16.5 retina TTCTGCTAGG (4) 1.8 0.0018 E18.5 retina GTGGCTCATA (21) 47.3 0.0473 E18.5 retina TTAAACTGTC (3) 25.5 0.0255 E18.5 retina TGTGTTTTGG (5) 9.1 0.0091 E18.5 retina GGAGCCCCTC (6) 5.5 0.0055 E18.5 retina CTTGAATCTA (3) 3.6 0.0036 P0.5 retina GTGGCTCATA (21) 41.2 0.0412 P0.5 retina GGAGCCCCTC (6) 7.9 0.0079 P0.5 retina TTAAACTGTC (3) 7.9 0.0079 P0.5 retina CTTGAATCTA (3) 2 0.002 P2.5 retina GTGGCTCATA (21) 49.3 0.0493 P2.5 retina TTAAACTGTC (3) 24.6 0.0246 P2.5 retina GGAGCCCCTC (6) 7 0.007 P2.5 retina TGTGTTTTGG (5) 7 0.007 P2.5 retina AAAAAAATTA (6) 1.8 0.0018 P2.5 retina CTTGAATCTA (3) 1.8 0.0018 P4.5 retina GTGGCTCATA (21) 53.5 0.0535 P4.5 retina TTAAACTGTC (3) 23.8 0.0238 P4.5 retina GGAGCCCCTC (6) 9.9 0.0099 P4.5 retina TGTGTTTTGG (5) 4 0.004 P4.5 retina GGATGGTGGA (6) 2 0.002 P6.5 retina GTGGCTCATA (21) 33.3 0.0333 P6.5 retina TTAAACTGTC (3) 6.7 0.0067 P6.5 retina TGTGTTTTGG (5) 5 0.005 P6.5 retina TTCTGCTAGG (4) 5 0.005 P6.5 retina GGAGCCCCTC (6) 3.3 0.0033 P6.5 retina AACACTTGGA (7) 1.7 0.0017 P10.5 crx- retina GTGGCTCATA (21) 33.4 0.0334 P10.5 crx- retina TTAAACTGTC (3) 9.3 0.0093 P10.5 crx- retina GGAGCCCCTC (6) 7.4 0.0074 P10.5 crx- retina CTTGAATCTA (3) 3.7 0.0037 P10.5 crx- retina TGTGTTTTGG (5) 3.7 0.0037 P10.5 crx+ retina GTGGCTCATA (21) 38.4 0.0384 P10.5 crx+ retina GGAGCCCCTC (6) 11.5 0.0115 P10.5 crx+ retina TTAAACTGTC (3) 9.6 0.0096 P10.5 crx+ retina TGTGTTTTGG (5) 5.8 0.0058 P10.5 crx+ retina CTTGAATCTA (3) 3.8 0.0038 P10.5 crx+ retina AACACTTGGA (7) 1.9 0.0019 P10.5 crx+ retina GGATGGTGGA (6) 1.9 0.0019 Adult retinal GTGGCTCATA (21) 24.1 0.0241 Adult retinal AACACTTGGA (7) 5.6 0.0056 Adult retinal GGAGCCCCTC (6) 5.6 0.0056 Adult retinal TTAAACTGTC (3) 3.7 0.0037 Adult retinal GGATGGTGGA (6) 1.9 0.0019 Adult retinal TGTGTTTTGG (5) 1.9 0.0019 ONL GTGGCTCATA (21) 49.8 0.0498 ONL TTAAACTGTC (3) 9.6 0.0096 ONL GGAGCCCCTC (6) 5.7 0.0057 ONL TGTGTTTTGG (5) 5.7 0.0057 ONL TTCTGCTAGG (4) 1.9 0.0019