Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273804
Racgap1
Rac GTPase-activating protein 1
15
15 F1
26934
Gene Ontology
intracellular signaling cascade
Human Homolog
RACGAP1[Rac GTPase activating protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATCTGGAAT
(
2
)
24.5
0.0245
P8 Cb GC
ATGGTGGACA (
4
)
17.9
0.0179
P8 Cb GC
TTGTGAAGGA
1.6
0.0016
Cb medulloblastoma
ATGGTGGACA (
4
)
9.2
0.0092
Cb medulloblastoma
TATCTGGAAT
(
2
)
4.6
0.0046
P8 GC+1d culture
ATGGTGGACA (
4
)
9.1
0.0091
P8 GC+1d culture
TATCTGGAAT
(
2
)
9.1
0.0091
P8 GC+1d culture
TTACAGGTAA
1.1
0.0011
P8 GC+SHH+1d culture
TATCTGGAAT
(
2
)
17.6
0.0176
P8 GC+SHH+1d culture
ATGGTGGACA (
4
)
12.9
0.0129
P8 GC+SHH+1d culture
TTGTGAAGGA
2.3
0.0023
P8 GC+SHH+1d culture
ATGGTGGACC
(
2
)
1.2
0.0012
3T3 fibroblasts
ATGGTGGACA (
4
)
28
0.028
3T3 fibroblasts
ATGGTGGACC
(
2
)
3.5
0.0035
E15 cortex
ATCCCTGCCA
4.9
0.0049
E15 cortex
ATGGTGGACA (
4
)
4.9
0.0049
P1 cortex
ATGGTGGACA (
4
)
9.1
0.0091
P1 cortex
TATCTGGAAT
(
2
)
4.5
0.0045
Hypothalamus
ATGGTGGACA (
4
)
10.9
0.0109
E12.5 retina
TATCTGGAAT
(
2
)
16.9
0.0169
E12.5 retina
ATGGTGGACA (
4
)
7.5
0.0075
E12.5 retina
TTACAGGTAA
1.9
0.0019
E14.5 retina
TATCTGGAAT
(
2
)
34.6
0.0346
E14.5 retina
ATGGTGGACA (
4
)
3.6
0.0036
E14.5 retina
ATCCCTGCCA
1.8
0.0018
E16.5 retina
TATCTGGAAT
(
2
)
21.7
0.0217
E16.5 retina
ATGGTGGACA (
4
)
3.6
0.0036
E16.5 retina
ATCCCTGCCA
1.8
0.0018
E18.5 retina
TATCTGGAAT
(
2
)
29.1
0.0291
P0.5 retina
TATCTGGAAT
(
2
)
13.7
0.0137
P0.5 retina
ATGGTGGACA (
4
)
5.9
0.0059
P0.5 retina
ATGGTGGACC
(
2
)
3.9
0.0039
P0.5 retina
TATTTGGAAT
2
0.002
P0.5 retina
TTACAGGTAA
2
0.002
P2.5 retina
TATCTGGAAT
(
2
)
33.4
0.0334
P2.5 retina
ATGGTGGACA (
4
)
1.8
0.0018
P2.5 retina
ATGGTGGACC
(
2
)
1.8
0.0018
P2.5 retina
TATTTGGAAT
1.8
0.0018
P2.5 retina
TTACAGGTAA
1.8
0.0018
P4.5 retina
TATCTGGAAT
(
2
)
11.9
0.0119
P4.5 retina
ATCCCTGCCA
2
0.002
P4.5 retina
ATGGTGGACA (
4
)
2
0.002
P6.5 retina
ATGGTGGACA (
4
)
11.7
0.0117
P6.5 retina
TATCTGGAAT
(
2
)
1.7
0.0017
P10.5 crx- retina
ATGGTGGACA (
4
)
5.6
0.0056
P10.5 crx+ retina
ATGGTGGACA (
4
)
17.3
0.0173
P10.5 crx+ retina
TATTTGGAAT
1.9
0.0019
Adult retinal
ATGGTGGACA (
4
)
11.1
0.0111
Adult retinal
TATCTGGAAT
(
2
)
1.9
0.0019
ONL
ATGGTGGACA (
4
)
15.3
0.0153
