Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273871
4933402L21Rik
RIKEN cDNA 4933402L21 gene
11
71059
Human Homolog
FLJ32384[hypothetical protein MGC39389]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
ATGATAATGA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
TATGTACATA (
12
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
ATGATAATGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
ATGATAATGA
(
3
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
ATGATAATGA
(
3
)
1.8
0.0018
Hypothalamus
TATGTACATA (
12
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
ATGATAATGA
(
3
)
1.9
0.0019
E12.5 retina
TATGTACATA (
12
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
TATGTACATA (
12
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
ATGATAATGA
(
3
)
1.8
0.0018
E18.5 retina
GTTGGATCTT
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
TATGTACATA (
12
)
3.5
0.0035
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
TATGTACATA (
12
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
GTTGGATCTT
1.9
0.0019
P10.5 crx+ retina
TATGTACATA (
12
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
GTTGGATCTT
1.9
0.0019
ONL
TATGTACATA (
12
)
1.9
0.0019
