Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27389	Vps41	vacuolar protein sorting 41 (yeast)	13	13 9.0 cM	218035
Gene Ontology	integral to membrane | vacuolar transport | vacuole organization and biogenesis
Human Homolog	VPS41[vacuolar protein sorting 41 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGAAGACC 8.2 0.0082 Cb medulloblastoma CACACTTGGC TGGGAAGACC 9.2 0.0092 P8 GC+1d culture CACACTTGGC TGGGAAGACC 12.5 0.0125 P8 GC+SHH+1d culture TGGGAAGACC 10.5 0.0105 3T3 fibroblasts TACCCCTGCA TGGGAAGACC 7 0.007 E15 cortex TACCCCTGCA 9.9 0.0099 P1 cortex ATTTGTTTAT 4.5 0.0045 Hypothalamus TGGGAAGACC 18.1 0.0181 E12.5 retina TGGGAAGACC 5.6 0.0056 E14.5 retina TGGGAAGACC 3.6 0.0036 E16.5 retina TCACTGAAGG (2) TGGGAAGACC 9 0.009 E18.5 retina TGGGAAGACC 7.3 0.0073 P0.5 retina ATTTGTTTAT 2 0.002 P2.5 retina TGGGAAGACC 7 0.007 P4.5 retina TGGGAAGACC 4 0.004 P6.5 retina CACACTTGGC TCACTGAAGG (2) 5 0.005 P10.5 crx- retina TCACTGAAGG (2) TGGGAAGACC 16.8 0.0168 P10.5 crx+ retina TGGGAAGACC 11.5 0.0115 Adult retinal CACACTTGGC TGGGAAGACC 11.2 0.0112 ONL ATTTGTTTAT CACACTTGGC TGGGAAGACC 7.6 0.0076