Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273915	AA589573	expressed sequence AA589573	6		101052
Mm.273915	Grcc3f	gene rich cluster, C3f gene	6	6 60.23 cM	14792
Gene Ontology	integral to membrane
Human Homolog	C3F[putative protein similar to nessy (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAACAAGA (3) 8.2 0.0082 P8 Cb GC GGGGGAGGGA (9) 4.9 0.0049 P8 Cb GC GCAAGGTCAG (4) 3.3 0.0033 P8 Cb GC AAGCTGGGTG (8) 1.6 0.0016 P8 Cb GC CAGTTGCTTA (4) 1.6 0.0016 P8 Cb GC GGGGGGAGGG (17) 1.6 0.0016 Cb medulloblastoma AGAAACAAGA (3) 30.1 0.0301 Cb medulloblastoma CAGTTGCTTA (4) 2.3 0.0023 Cb medulloblastoma GCAAGGTCAG (4) 2.3 0.0023 Cb medulloblastoma TACTGCTAAG (3) 2.3 0.0023 P8 GC+1d culture AGAAACAAGA (3) 10.3 0.0103 P8 GC+1d culture GGGGGAGGGA (9) 4.6 0.0046 P8 GC+1d culture GGGGGCGGGG (10) 3.4 0.0034 P8 GC+1d culture GCAAGGTCAG (4) 2.3 0.0023 P8 GC+1d culture CAGTTGCTTA (4) 1.1 0.0011 P8 GC+1d culture TACCCACCTA (5) 1.1 0.0011 P8 GC+1d culture TACTGCTAAG (3) 1.1 0.0011 P8 GC+SHH+1d culture AGAAACAAGA (3) 23.4 0.0234 P8 GC+SHH+1d culture GCAAGGTCAG (4) 4.7 0.0047 P8 GC+SHH+1d culture AAGCTGGGTG (8) 1.2 0.0012 P8 GC+SHH+1d culture CAGTTGCTTA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGAGGGA (9) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGCGGGG (10) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGGGTGG (12) 1.2 0.0012 3T3 fibroblasts GCAAGGTCAG (4) 7 0.007 3T3 fibroblasts AGAAACAAGA (3) 3.5 0.0035 3T3 fibroblasts CAGTTGCTTA (4) 3.5 0.0035 3T3 fibroblasts GGGGGAGGGA (9) 3.5 0.0035 3T3 fibroblasts GGGGGGGTGG (12) 3.5 0.0035 E15 cortex AGAAACAAGA (3) 9.9 0.0099 E15 cortex GCAAGGTCAG (4) 4.9 0.0049 E15 cortex GGGGGCGGGG (10) 4.9 0.0049 E15 cortex GTGGAGCACG (3) 4.9 0.0049 P1 cortex AGAAACAAGA (3) 22.7 0.0227 Hypothalamus AGAAACAAGA (3) 23.5 0.0235 Hypothalamus GCAAGGTCAG (4) 1.8 0.0018 Hypothalamus GGCAAAGGCC (3) 1.8 0.0018 E12.5 retina AGAAACAAGA (3) 11.3 0.0113 E12.5 retina GCAAGGTCAG (4) 9.4 0.0094 E12.5 retina CAGTTGCTTA (4) 5.6 0.0056 E12.5 retina GGGGGCGGGG (10) 3.8 0.0038 E12.5 retina AAGCTGGGTG (8) 1.9 0.0019 E12.5 retina GGGGGGGTGG (12) 1.9 0.0019 E12.5 retina TACCCACCTA (5) 1.9 0.0019 E14.5 retina AGAAACAAGA (3) 10.9 0.0109 E14.5 retina CAGTTGCTTA (4) 1.8 0.0018 E14.5 retina GCAAGGTCAG (4) 1.8 0.0018 E14.5 retina GGGGGAGGGA (9) 1.8 0.0018 E14.5 retina GTGGAGCACG (3) 1.8 0.0018 E14.5 retina TACTGCTAAG (3) 1.8 0.0018 E16.5 retina AGAAACAAGA (3) 9.1 0.0091 E16.5 retina GCAAGGTCAG (4) 3.6 0.0036 E16.5 retina GGCGCCTTTG (2) 1.8 0.0018 E16.5 retina GTGGAGCACG (3) 1.8 0.0018 E18.5 retina AGAAACAAGA (3) 10.9 0.0109 E18.5 retina GCAAGGTCAG (4) 3.6 0.0036 E18.5 retina GGCAAAGGCC (3) 3.6 0.0036 E18.5 retina AAGCTGGGTG (8) 1.8 0.0018 E18.5 retina CAGTTGCTTA (4) 1.8 0.0018 E18.5 retina GGGGGGAGGG (17) 1.8 0.0018 E18.5 retina TACTGCTAAG (3) 1.8 0.0018 P0.5 retina AGAAACAAGA (3) 17.7 0.0177 P0.5 retina GCAAGGTCAG (4) 11.8 0.0118 P2.5 retina AGAAACAAGA (3) 17.6 0.0176 P2.5 retina GCAAGGTCAG (4) 7 0.007 P2.5 retina CAGTTGCTTA (4) 3.5 0.0035 P2.5 retina AAGCTGGGTG (8) 1.8 0.0018 P2.5 retina GGGGGCGGGG (10) 1.8 0.0018 P2.5 retina GGGGGGAGGG (17) 1.8 0.0018 P2.5 retina TACCCACCTA (5) 1.8 0.0018 P2.5 retina TACTGCTAAG (3) 1.8 0.0018 P4.5 retina AGAAACAAGA (3) 4 0.004 P4.5 retina AAGCTGGGTG (8) 2 0.002 P4.5 retina GGGGGAGGGA (9) 2 0.002 P4.5 retina GGGGGGAGGG (17) 2 0.002 P6.5 retina AGAAACAAGA (3) 8.3 0.0083 P6.5 retina GGGGGAGGGA (9) 6.7 0.0067 P6.5 retina GCAAGGTCAG (4) 5 0.005 P6.5 retina CAGTTGCTTA (4) 1.7 0.0017 P6.5 retina GGCAAAGGCC (3) 1.7 0.0017 P6.5 retina GTGGAGCACG (3) 1.7 0.0017 P6.5 retina TACTGCTAAG (3) 1.7 0.0017 P10.5 crx- retina AGAAACAAGA (3) 18.6 0.0186 P10.5 crx- retina GCAAGGTCAG (4) 7.4 0.0074 P10.5 crx- retina CAGTTGCTTA (4) 1.9 0.0019 P10.5 crx- retina GGCAAAGGCC (3) 1.9 0.0019 P10.5 crx+ retina GCAAGGTCAG (4) 7.7 0.0077 P10.5 crx+ retina AGAAACAAGA (3) 5.8 0.0058 P10.5 crx+ retina GGGGGAGGGA (9) 1.9 0.0019 P10.5 crx+ retina GGGGGGAGGG (17) 1.9 0.0019 Adult retinal GCAAGGTCAG (4) 7.4 0.0074 Adult retinal AGAAACAAGA (3) 5.6 0.0056 Adult retinal GGCAAAGGCC (3) 1.9 0.0019 Adult retinal GTGGAGCACG (3) 1.9 0.0019 ONL AGAAACAAGA (3) 3.8 0.0038 ONL GGCGCCTTTG (2) 3.8 0.0038 ONL GGGGGGAGGG (17) 1.9 0.0019 ONL GTGGAGCACG (3) 1.9 0.0019