Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.274232 Smarcal1Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 1  1 40.0 cM  54380 
 Gene Ontology DNA dependent ATPase activity
 Human Homolog SMARCAL1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAGGCAAAAC (40)11.40.0114
P8 Cb GCGGGCTCATTG4.90.0049
Cb medulloblastomaGGGCTCATTG6.90.0069
Cb medulloblastomaCAGGCAAAAC (40)4.60.0046
P8 GC+1d cultureCAGGCAAAAC (40)5.70.0057
P8 GC+1d cultureGGGCTCATTG4.60.0046
P8 GC+SHH+1d cultureCAGGCAAAAC (40)11.70.0117
P8 GC+SHH+1d cultureGGGCTCATTG8.20.0082
P8 GC+SHH+1d cultureCTGGTCTCCA (4)2.30.0023
P8 GC+SHH+1d cultureCTGCTGCAGC (7)1.20.0012
3T3 fibroblastsCAGGCAAAAC (40)10.50.0105
3T3 fibroblastsGGGCTCATTG3.50.0035
E15 cortexCAGGCAAAAC (40)4.90.0049
E15 cortexGAATTCCTGG (5)4.90.0049
E15 cortexGGGCTCATTG4.90.0049
P1 cortexCAGGCAAAAC (40)9.10.0091
HypothalamusCAGGCAAAAC (40)5.40.0054
HypothalamusGAATTCCTGG (5)1.80.0018
HypothalamusGGGCTCATTG1.80.0018
HypothalamusGGGCTCCTTG (5)1.80.0018
E12.5 retinaCAGGCAAAAC (40)20.70.0207
E12.5 retinaGGGCTCATTG5.60.0056
E14.5 retinaCAGGCAAAAC (40)12.80.0128
E14.5 retinaGGGCTCATTG5.50.0055
E14.5 retinaCTGCTGCAGC (7)1.80.0018
E14.5 retinaGGGCTCCTTG (5)1.80.0018
E16.5 retinaGGGCTCATTG12.70.0127
E16.5 retinaCAGGCAAAAC (40)9.10.0091
E16.5 retinaGAATTCCTGG (5)3.60.0036
E16.5 retinaCTGGTCTCCA (4)1.80.0018
E18.5 retinaGGGCTCATTG200.02
E18.5 retinaCAGGCAAAAC (40)12.70.0127
P0.5 retinaCAGGCAAAAC (40)13.70.0137
P0.5 retinaCTGGTCTCCA (4)3.90.0039
P0.5 retinaGGGCTCATTG3.90.0039
P2.5 retinaCAGGCAAAAC (40)24.60.0246
P2.5 retinaGGGCTCATTG70.007
P2.5 retinaCTGCTGCAGC (7)1.80.0018
P2.5 retinaGGGCTCCTTG (5)1.80.0018
P4.5 retinaCAGGCAAAAC (40)13.90.0139
P4.5 retinaGGGCTCATTG7.90.0079
P4.5 retinaCTGCTGCAGC (7)20.002
P6.5 retinaCAGGCAAAAC (40)16.70.0167
P6.5 retinaGGGCTCATTG100.01
P10.5 crx- retinaCAGGCAAAAC (40)11.10.0111
P10.5 crx- retinaGGGCTCATTG7.40.0074
P10.5 crx+ retinaCAGGCAAAAC (40)13.50.0135
P10.5 crx+ retinaGGGCTCATTG13.50.0135
Adult retinalCAGGCAAAAC (40)11.10.0111
Adult retinalGGGCTCATTG9.30.0093
Adult retinalGGGCTCCTTG (5)1.90.0019
Adult retinalTCAAAAATGT (3)1.90.0019
ONLCAGGCAAAAC (40)34.50.0345
ONLGGGCTCATTG3.80.0038