Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274249	Ralgps1	Ral GEF with PH domain and SH3 binding motif 1	2		241308
Gene Ontology	guanyl-nucleotide exchange factor activity | intracellular signaling cascade
Human Homolog	RALGPS1[Ral GEF with PH domain and SH3 binding motif 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC CAGTTGTGTG (5) 4.9 0.0049 P8 Cb GC GCTGCTGTCC (6) 3.3 0.0033 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CAGGGTCTGG (2) 16.2 0.0162 Cb medulloblastoma CAGTTGTGTG (5) 2.3 0.0023 Cb medulloblastoma GCTGCTGTCC (6) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CAGGGTCTGG (2) 4.6 0.0046 P8 GC+1d culture CAGTTGTGTG (5) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CAGGGTCTGG (2) 4.7 0.0047 P8 GC+SHH+1d culture CAGTTGTGTG (5) 3.5 0.0035 3T3 fibroblasts CAGGGTCTGC (2) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CAGGGTCTGC (2) 9.9 0.0099 E15 cortex CAGGGTCTGG (2) 4.9 0.0049 E15 cortex CAGTTGTGTG (5) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CAGGGTCTGC (2) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CAGGGTCTGG (2) 7.2 0.0072 Hypothalamus CAGTTGTGTG (5) 1.8 0.0018 Hypothalamus GCTGCTGTCC (6) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina CAGGGTCTGG (2) 3.8 0.0038 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CAGGGTCTGG (2) 7.3 0.0073 E14.5 retina CAGTTGTGTG (5) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CAGGGTCTGG (2) 7.2 0.0072 E16.5 retina CAGGGTCTGC (2) 1.8 0.0018 E16.5 retina CAGTTGTGTG (5) 1.8 0.0018 E16.5 retina GCTGCTGTCC (6) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CAGGGTCTGG (2) 9.1 0.0091 E18.5 retina GCTGCTGTCC (6) 3.6 0.0036 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina CAGGGTCTGG (2) 13.7 0.0137 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CAGGGTCTGG (2) 19.4 0.0194 P2.5 retina CAGTTGTGTG (5) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CAGGGTCTGG (2) 31.7 0.0317 P4.5 retina CAGTTGTGTG (5) 5.9 0.0059 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAGGGTCTGG (2) 21.7 0.0217 P6.5 retina CAGGGTCTGC (2) 5 0.005 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CAGGGTCTGG (2) 11.1 0.0111 P10.5 crx- retina CAGTTGTGTG (5) 3.7 0.0037 P10.5 crx- retina GCACCCCAAA (3) 1.9 0.0019 P10.5 crx- retina GCTGCTGTCC (6) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CAGGGTCTGG (2) 26.9 0.0269 P10.5 crx+ retina CAGTTGTGTG (5) 1.9 0.0019 P10.5 crx+ retina GCACCCCAAA (3) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CAGGGTCTGG (2) 5.6 0.0056 Adult retinal CAGTTGTGTG (5) 1.9 0.0019 Adult retinal GCACCCCAAA (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CAGTTGTGTG (5) 3.8 0.0038 ONL CAGGGTCTGG (2) 1.9 0.0019