Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274329
A030003K02Rik
RIKEN cDNA A030003K02 gene
11
109224
Mm.274329
Phf12
PHD finger protein 12
11
268448
Human Homolog
PHF12[PHD finger protein 12]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAAAAAA (
69
)
8.2
0.0082
P8 Cb GC
GAGAATCTCT
(
4
)
1.6
0.0016
P8 Cb GC
TAGTGTTGAC (
3
)
1.6
0.0016
P8 Cb GC
TGGTAGAGTG
(
2
)
1.6
0.0016
Cb medulloblastoma
GGAAAAAAAA (
69
)
41.6
0.0416
Cb medulloblastoma
TGACTTCTCT
(
6
)
2.3
0.0023
P8 GC+1d culture
GGAAAAAAAA (
69
)
5.7
0.0057
P8 GC+1d culture
TGGTAGAGTG
(
2
)
2.3
0.0023
P8 GC+1d culture
AAATGAAGAA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAAAAAAA (
69
)
7
0.007
P8 GC+SHH+1d culture
TGGTAGAGTG
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GGAAAGCGGC
(
4
)
1.2
0.0012
E15 cortex
GGAAAAAAAA (
69
)
9.9
0.0099
E15 cortex
GGAAAGCGGC
(
4
)
4.9
0.0049
P1 cortex
GGAAAAAAAA (
69
)
4.5
0.0045
P1 cortex
TGGTAGAGTG
(
2
)
4.5
0.0045
Hypothalamus
GGAAAAAAAA (
69
)
14.5
0.0145
E12.5 retina
TGGTAGAGTG
(
2
)
3.8
0.0038
E12.5 retina
GAGAATCTCT
(
4
)
1.9
0.0019
E12.5 retina
GGAAAAAAAA (
69
)
1.9
0.0019
E12.5 retina
GGAAAGCGGC
(
4
)
1.9
0.0019
E14.5 retina
GGAAAAAAAA (
69
)
10.9
0.0109
E14.5 retina
GGAAAGCGGC
(
4
)
3.6
0.0036
E14.5 retina
TGGTAGAGTG
(
2
)
3.6
0.0036
E16.5 retina
AAATGAAGAA (
4
)
1.8
0.0018
E16.5 retina
GAGAATCTCT
(
4
)
1.8
0.0018
E16.5 retina
GGAAAAAAAA (
69
)
1.8
0.0018
E16.5 retina
GGAAAGCGGC
(
4
)
1.8
0.0018
E16.5 retina
TAGTGTTGAC (
3
)
1.8
0.0018
E18.5 retina
GGAAAAAAAA (
69
)
16.4
0.0164
E18.5 retina
TAGTGTTGAC (
3
)
1.8
0.0018
E18.5 retina
TGACTTCTCT
(
6
)
1.8
0.0018
E18.5 retina
TGGTAGAGTG
(
2
)
1.8
0.0018
P0.5 retina
GGAAAAAAAA (
69
)
13.7
0.0137
P0.5 retina
TGGTAGAGTG
(
2
)
3.9
0.0039
P0.5 retina
GGAAAGCGGC
(
4
)
2
0.002
P2.5 retina
GGAAAAAAAA (
69
)
7
0.007
P2.5 retina
GGAAAGCGGC
(
4
)
1.8
0.0018
P2.5 retina
TGACTTCTCT
(
6
)
1.8
0.0018
P2.5 retina
TGGTAGAGTG
(
2
)
1.8
0.0018
P4.5 retina
GGAAAAAAAA (
69
)
13.9
0.0139
P6.5 retina
GGAAAAAAAA (
69
)
13.3
0.0133
P6.5 retina
TGGTAGAGTG
(
2
)
5
0.005
P6.5 retina
AAATGAAGAA (
4
)
1.7
0.0017
P6.5 retina
GAGAATCTCT
(
4
)
1.7
0.0017
P10.5 crx- retina
GGAAAAAAAA (
69
)
3.7
0.0037
P10.5 crx- retina
TGGTAGAGTG
(
2
)
3.7
0.0037
P10.5 crx- retina
GGAAAGCGGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGAAAAAAAA (
69
)
15.4
0.0154
P10.5 crx+ retina
TGGTAGAGTG
(
2
)
1.9
0.0019
Adult retinal
GGAAAAAAAA (
69
)
5.6
0.0056
ONL
GGAAAAAAAA (
69
)
17.2
0.0172
ONL
AAATGAAGAA (
4
)
1.9
0.0019
