| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTAGGCTGT (2) CAGCTGGCTT (2) TTCTTTTGAG (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | CAGGTGGGTT (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | ATTAGGCTGT (2) CAGGTGGGTT (3) GCTCCGGGTT (2) TTTCCAGCGT (2)
| 6.7 | 0.0067 |
| P8 GC+SHH+1d culture | CAGCTGGCTT (2) TTTCCAGCGT (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CAGGTGGGTT (3)
| 3.5 | 0.0035 |
| E15 cortex | AGAACTTAAA (3)
| 4.9 | 0.0049 |
| P1 cortex | CAGGTGGGTT (3)
| 4.5 | 0.0045 |
| Hypothalamus | CAGCTGGCTT (2) TTCTTTTGAG (2) TTTCCAGCGT (2)
| 5.4 | 0.0054 |
| E12.5 retina | CAGCTGGCTT (2) TTTCCAGCGT (2)
| 5.7 | 0.0057 |
| E14.5 retina | AGAACTTAAA (3) CAGGTGGGTT (3) TTTCCAGCGT (2)
| 7.2 | 0.0072 |
| E16.5 retina | AGAACTTAAA (3) TTTCCAGCGT (2)
| 5.4 | 0.0054 |
| E18.5 retina | CAGCTGGCTT (2) CAGGTGGGTT (3) TTTCCAGCGT (2)
| 7.2 | 0.0072 |
| P0.5 retina | ATTAGGCTGT (2) TTTCCAGCGT (2)
| 4 | 0.004 |
| P2.5 retina | ATTAGGCTGT (2) CAGGTGGGTT (3)
| 7.1 | 0.0071 |
| P4.5 retina | CAGGTGGGTT (3) TTCTTTTGAG (2)
| 4 | 0.004 |
| P6.5 retina | CAGGTGGGTT (3) GCTCCGGGTT (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | ATTAGGCTGT (2) CAGCTGGCTT (2) TTTCCAGCGT (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | GCTCCGGGTT (2)
| 3.8 | 0.0038 |
| Adult retinal | GCTCCGGGTT (2) TTCTTTTGAG (2) TTTCCAGCGT (2)
| 7.5 | 0.0075 |
| ONL | CAGCTGGCTT (2) TTTCCAGCGT (2)
| 3.8 | 0.0038 |