Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274816	A330042M18Rik	RIKEN cDNA A330042M18 gene	11		320167
Mm.274816	Ap1b1	adaptor protein complex AP-1, beta 1 subunit	11		11764
Gene Ontology	clathrin coat of trans-Golgi network vesicle | coated pit | endocytosis | Golgi apparatus | Golgi trans face | intracellular protein transport | protein complex assembly | protein transport | transport | vesicle-mediated transport
Human Homolog	AP1B1[adaptor-related protein complex 1, beta 1 subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCTGTCAG (4) 21.2 0.0212 P8 Cb GC GACAGGCATT (5) 4.9 0.0049 P8 Cb GC AAGGGGCAAG (2) 3.3 0.0033 P8 Cb GC TGGGTGCTAG (16) 3.3 0.0033 P8 Cb GC CAGACAGACA (12) 1.6 0.0016 Cb medulloblastoma GACAGGCATT (5) 4.6 0.0046 Cb medulloblastoma AGCCTGTCAG (4) 2.3 0.0023 Cb medulloblastoma CTTCTGGTGT (3) 2.3 0.0023 P8 GC+1d culture GACAGGCATT (5) 4.6 0.0046 P8 GC+1d culture AGCCTGTCAG (4) 3.4 0.0034 P8 GC+1d culture CTTCTGGTGT (3) 2.3 0.0023 P8 GC+1d culture CACATTTCTT (2) 1.1 0.0011 P8 GC+1d culture CAGACAGACA (12) 1.1 0.0011 P8 GC+SHH+1d culture GACAGGCATT (5) 9.4 0.0094 P8 GC+SHH+1d culture CTTCTGGTGT (3) 5.9 0.0059 P8 GC+SHH+1d culture AGCCTGTCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture CACATTTCTT (2) 1.2 0.0012 E15 cortex AGCCTGTCAG (4) 9.9 0.0099 E15 cortex CTTCTGGTGT (3) 9.9 0.0099 E15 cortex CACATTTCTT (2) 4.9 0.0049 E15 cortex TGGGTGCTAG (16) 4.9 0.0049 P1 cortex AGCCTGTCAG (4) 9.1 0.0091 P1 cortex GACAGGCATT (5) 4.5 0.0045 Hypothalamus CACATTTCTT (2) 3.6 0.0036 Hypothalamus CTTCTGGTGT (3) 3.6 0.0036 Hypothalamus TCTCCCCCTC (6) 3.6 0.0036 Hypothalamus AGCCTGTCAG (4) 1.8 0.0018 Hypothalamus TGGGTGCTAG (16) 1.8 0.0018 E12.5 retina AGCCTGTCAG (4) 5.6 0.0056 E12.5 retina CACACAGACA (8) 3.8 0.0038 E12.5 retina CTTCTGGTGT (3) 3.8 0.0038 E12.5 retina GACAGGCATT (5) 1.9 0.0019 E12.5 retina GTGCTGGCCC (7) 1.9 0.0019 E14.5 retina AGCCTGTCAG (4) 5.5 0.0055 E14.5 retina CTTCTGGTGT (3) 5.5 0.0055 E14.5 retina GACAGGCATT (5) 3.6 0.0036 E14.5 retina TGGGTGCTAG (16) 3.6 0.0036 E16.5 retina CTTCTGGTGT (3) 9.1 0.0091 E16.5 retina AAGGGGCAAG (2) 3.6 0.0036 E16.5 retina AGCCTGTCAG (4) 3.6 0.0036 E16.5 retina CACACAGACA (8) 1.8 0.0018 E16.5 retina GACAGGCATT (5) 1.8 0.0018 E18.5 retina AGCCTGTCAG (4) 14.6 0.0146 E18.5 retina GACAGGCATT (5) 7.3 0.0073 E18.5 retina CACATTTCTT (2) 1.8 0.0018 P0.5 retina CTTCTGGTGT (3) 5.9 0.0059 P0.5 retina AGCCTGTCAG (4) 3.9 0.0039 P0.5 retina GACAGGCATT (5) 3.9 0.0039 P0.5 retina CACACAGACA (8) 2 0.002 P0.5 retina CACATTTCTT (2) 2 0.002 P2.5 retina AGCCTGTCAG (4) 14.1 0.0141 P2.5 retina TGGGTGCTAG (16) 7 0.007 P2.5 retina GACAGGCATT (5) 3.5 0.0035 P2.5 retina GTGCTGGCCC (7) 3.5 0.0035 P2.5 retina CACACAGACA (8) 1.8 0.0018 P4.5 retina AGCCTGTCAG (4) 9.9 0.0099 P4.5 retina CTTCTGGTGT (3) 5.9 0.0059 P4.5 retina GACAGGCATT (5) 4 0.004 P4.5 retina AAGGGGCAAG (2) 2 0.002 P4.5 retina CACATTTCTT (2) 2 0.002 P6.5 retina CTTCTGGTGT (3) 15 0.015 P6.5 retina AGCCTGTCAG (4) 10 0.01 P6.5 retina GACAGGCATT (5) 5 0.005 P6.5 retina CACACAGACA (8) 3.3 0.0033 P6.5 retina CACATTTCTT (2) 1.7 0.0017 P6.5 retina CAGACAGACA (12) 1.7 0.0017 P10.5 crx- retina AGCCTGTCAG (4) 9.3 0.0093 P10.5 crx- retina CTTCTGGTGT (3) 9.3 0.0093 P10.5 crx- retina GACAGGCATT (5) 7.4 0.0074 P10.5 crx- retina CACATTTCTT (2) 1.9 0.0019 P10.5 crx- retina TGGGTGCTAG (16) 1.9 0.0019 P10.5 crx+ retina AGCCTGTCAG (4) 17.3 0.0173 P10.5 crx+ retina CTTCTGGTGT (3) 13.5 0.0135 P10.5 crx+ retina GACAGGCATT (5) 5.8 0.0058 P10.5 crx+ retina TGGGTGCTAG (16) 5.8 0.0058 P10.5 crx+ retina CACACAGACA (8) 1.9 0.0019 P10.5 crx+ retina CAGACAGACA (12) 1.9 0.0019 P10.5 crx+ retina TCTCCCCCTC (6) 1.9 0.0019 Adult retinal CTTCTGGTGT (3) 20.4 0.0204 Adult retinal AGCCTGTCAG (4) 5.6 0.0056 Adult retinal CACACAGACA (8) 3.7 0.0037 Adult retinal GACAGGCATT (5) 1.9 0.0019 Adult retinal TGGGTGCTAG (16) 1.9 0.0019 ONL CTTCTGGTGT (3) 5.7 0.0057 ONL CACACAGACA (8) 3.8 0.0038 ONL CACATTTCTT (2) 3.8 0.0038 ONL GACAGGCATT (5) 3.8 0.0038 ONL TGGGTGCTAG (16) 3.8 0.0038