Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274846	Ilk	integrin linked kinase	7	7 E1	16202
Gene Ontology	ATP binding | establishment and/or maintenance of epithelial cell polarity | focal adhesion | focal adhesion | integrin-mediated signaling pathway | kinase activity | positive regulation of cell proliferation | protein amino acid phosphorylation | protein binding | protein binding | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	ILK[integrin-linked kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 16 In Situ Hybridization Images

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SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGGGATCA (2) 29.4 0.0294 P8 Cb GC GAGGACTTGA (2) 14.7 0.0147 P8 Cb GC GACGAGATGG (9) 3.3 0.0033 P8 Cb GC GCTGGGGGAG (3) 3.3 0.0033 P8 Cb GC AATGAAGACC 1.6 0.0016 P8 Cb GC GACTTCAATG (5) 1.6 0.0016 P8 Cb GC TGGCAGAGGA (5) 1.6 0.0016 P8 Cb GC TTTCTAGGCC 1.6 0.0016 Cb medulloblastoma GGAGGGATCA (2) 25.4 0.0254 Cb medulloblastoma GACGAGATGG (9) 2.3 0.0023 Cb medulloblastoma TGGCAGAGGA (5) 2.3 0.0023 P8 GC+1d culture GGAGGGATCA (2) 26.3 0.0263 P8 GC+1d culture GAGGACTTGA (2) 12.6 0.0126 P8 GC+1d culture ATGTCTCCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGAGGGATCA (2) 30.4 0.0304 P8 GC+SHH+1d culture GAGGACTTGA (2) 18.7 0.0187 P8 GC+SHH+1d culture CTTTTCATTA (4) 1.2 0.0012 P8 GC+SHH+1d culture GACTTCAATG (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTCTAGGCC 1.2 0.0012 3T3 fibroblasts GGAGGGATCA (2) 17.5 0.0175 3T3 fibroblasts GAGGACTTGA (2) 14 0.014 3T3 fibroblasts GGAAGTCTGA (3) 3.5 0.0035 E15 cortex GGAGGGATCA (2) 19.8 0.0198 E15 cortex GACGAGATGG (9) 9.9 0.0099 E15 cortex GAGGACTTGA (2) 4.9 0.0049 P1 cortex ATGTCTCCCC (2) 9.1 0.0091 P1 cortex GGAGGGATCA (2) 9.1 0.0091 P1 cortex GAGGACTTGA (2) 4.5 0.0045 Hypothalamus GAGGACTTGA (2) 16.3 0.0163 Hypothalamus GGAGGGATCA (2) 14.5 0.0145 Hypothalamus TTTCTAGGCC 3.6 0.0036 Hypothalamus AATGAAGACC 1.8 0.0018 E12.5 retina GGAGGGATCA (2) 41.3 0.0413 E12.5 retina GAGGACTTGA (2) 9.4 0.0094 E12.5 retina TGTGTAACTC 5.6 0.0056 E12.5 retina CTTTTCATTA (4) 1.9 0.0019 E14.5 retina GAGGACTTGA (2) 10.9 0.0109 E14.5 retina GGAGGGATCA (2) 7.3 0.0073 E14.5 retina GACGAGATGG (9) 3.6 0.0036 E14.5 retina GGGGGAAATA (5) 3.6 0.0036 E16.5 retina GGAGGGATCA (2) 16.3 0.0163 E16.5 retina GAGGACTTGA (2) 9.1 0.0091 E16.5 retina GACGAGATGG (9) 7.2 0.0072 E16.5 retina GGAAGTCTGA (3) 1.8 0.0018 E16.5 retina GGGGGAAATA (5) 1.8 0.0018 E16.5 retina TGGCAGAGGA (5) 1.8 0.0018 E18.5 retina GGAGGGATCA (2) 45.5 0.0455 E18.5 retina GAGGACTTGA (2) 9.1 0.0091 E18.5 retina GACGAGATGG (9) 3.6 0.0036 P0.5 retina GGAGGGATCA (2) 31.4 0.0314 P0.5 retina GAGGACTTGA (2) 7.9 0.0079 P2.5 retina GGAGGGATCA (2) 52.8 0.0528 P2.5 retina GAGGACTTGA (2) 12.3 0.0123 P2.5 retina AGGACTTTAA (6) 1.8 0.0018 P2.5 retina GGGGGAAATA (5) 1.8 0.0018 P2.5 retina TGGCAGAGGA (5) 1.8 0.0018 P4.5 retina GGAGGGATCA (2) 45.6 0.0456 P4.5 retina GAGGACTTGA (2) 9.9 0.0099 P4.5 retina AATGAAGACC 2 0.002 P4.5 retina CTTTTCATTA (4) 2 0.002 P4.5 retina GACTTCAATG (5) 2 0.002 P4.5 retina GGAAGTCTGA (3) 2 0.002 P6.5 retina GGAGGGATCA (2) 26.7 0.0267 P6.5 retina GAGGACTTGA (2) 8.3 0.0083 P6.5 retina TGGCAGAGGA (5) 3.3 0.0033 P6.5 retina GACGAGATGG (9) 1.7 0.0017 P10.5 crx- retina GAGGACTTGA (2) 24.2 0.0242 P10.5 crx- retina GGAGGGATCA (2) 11.1 0.0111 P10.5 crx- retina ATGTCTCCCC (2) 1.9 0.0019 P10.5 crx- retina CTTTTCATTA (4) 1.9 0.0019 P10.5 crx+ retina GGAGGGATCA (2) 36.5 0.0365 P10.5 crx+ retina GAGGACTTGA (2) 13.5 0.0135 P10.5 crx+ retina AGGACTTTAA (6) 3.8 0.0038 P10.5 crx+ retina TGGCAGAGGA (5) 1.9 0.0019 P10.5 crx+ retina TGTGTAACTC 1.9 0.0019 Adult retinal GGAGGGATCA (2) 18.5 0.0185 Adult retinal GAGGACTTGA (2) 14.8 0.0148 Adult retinal TGTGTAACTC 3.7 0.0037 Adult retinal GCTGGGGGAG (3) 1.9 0.0019 Adult retinal TGGCAGAGGA (5) 1.9 0.0019 ONL GGAGGGATCA (2) 13.4 0.0134 ONL ATGTCTCCCC (2) 3.8 0.0038 ONL GAGGACTTGA (2) 1.9 0.0019