Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274943
Rutbc3
RUN and TBC1 domain containing 3
15
105835
Human Homolog
RUTBC3[RUN and TBC1 domain containing 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCCTGAGGA
(
2
)
6.5
0.0065
P8 Cb GC
GTGGGTGTTG (
2
)
1.6
0.0016
P8 Cb GC
TAGACACCTG
(
5
)
1.6
0.0016
Cb medulloblastoma
GTCCTGAGGA
(
2
)
4.6
0.0046
Cb medulloblastoma
ATCAGTGTCT
(
2
)
2.3
0.0023
Cb medulloblastoma
GTGGGTGTTG (
2
)
2.3
0.0023
P8 GC+1d culture
GTGGGTGTTG (
2
)
2.3
0.0023
P8 GC+1d culture
ATCAGTGTCT
(
2
)
1.1
0.0011
P8 GC+1d culture
CTGGGATCTA (
6
)
1.1
0.0011
P8 GC+1d culture
GAATAGACCC
1.1
0.0011
P8 GC+1d culture
TAGACACCTG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGACACCTG
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GTCCTGAGGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGGGATCTA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGTGTTG (
2
)
1.2
0.0012
3T3 fibroblasts
GTGGGTGTTG (
2
)
17.5
0.0175
E15 cortex
GTGGGTGTTG (
2
)
9.9
0.0099
E15 cortex
GAATAGACCC
4.9
0.0049
P1 cortex
GTGGGTGTTG (
2
)
4.5
0.0045
Hypothalamus
GTCCTGAGGA
(
2
)
1.8
0.0018
E12.5 retina
GTCCTGAGGA
(
2
)
5.6
0.0056
E12.5 retina
GAATAGACCC
1.9
0.0019
E14.5 retina
CTGGGATCTA (
6
)
7.3
0.0073
E14.5 retina
GTCCTGAGGA
(
2
)
3.6
0.0036
E14.5 retina
ATCAGTGTCT
(
2
)
1.8
0.0018
E16.5 retina
CTGGGATCTA (
6
)
5.4
0.0054
E16.5 retina
GTGGGTGTTG (
2
)
5.4
0.0054
E18.5 retina
CTGGGATCTA (
6
)
1.8
0.0018
E18.5 retina
GAATAGACCC
1.8
0.0018
P0.5 retina
CTGGGATCTA (
6
)
5.9
0.0059
P0.5 retina
GTCCTGAGGA
(
2
)
5.9
0.0059
P0.5 retina
GTGGGTGTTG (
2
)
2
0.002
P2.5 retina
GTGGGTGTTG (
2
)
3.5
0.0035
P2.5 retina
GAATAGACCC
1.8
0.0018
P4.5 retina
GTGGGTGTTG (
2
)
2
0.002
P6.5 retina
GTGGGTGTTG (
2
)
5
0.005
P6.5 retina
TAGACACCTG
(
5
)
3.3
0.0033
P6.5 retina
GTCCTGAGGA
(
2
)
1.7
0.0017
P10.5 crx- retina
GTCCTGAGGA
(
2
)
7.4
0.0074
P10.5 crx- retina
GTGGGTGTTG (
2
)
7.4
0.0074
P10.5 crx- retina
TAGACACCTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
GTGGGTGTTG (
2
)
7.7
0.0077
P10.5 crx+ retina
ATCAGTGTCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTCCTGAGGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAGACACCTG
(
5
)
1.9
0.0019
Adult retinal
GTGGGTGTTG (
2
)
5.6
0.0056
Adult retinal
GAATAGACCC
3.7
0.0037
Adult retinal
GTCCTGAGGA
(
2
)
3.7
0.0037
Adult retinal
ATCAGTGTCT
(
2
)
1.9
0.0019
ONL
ATCAGTGTCT
(
2
)
1.9
0.0019
ONL
GAATAGACCC
1.9
0.0019
ONL
GTCCTGAGGA
(
2
)
1.9
0.0019
