Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275127	Def8	differentially expressed in FDCP 8	8	8 E1 (8 67.0 cM)	23854
Gene Ontology	cellular_component unknown | intracellular signaling cascade | molecular_function unknown
Human Homolog	LOC342646[similar to differentially expressed in FDCP 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGGAGGAG (5) 3.3 0.0033 P8 Cb GC TTTCCAACTA 3.3 0.0033 P8 Cb GC AATAAAGCCA (3) 1.6 0.0016 P8 Cb GC AGTTAAGCAT 1.6 0.0016 Cb medulloblastoma AATAAAGCCA (3) 71.7 0.0717 Cb medulloblastoma AGTTAAGCAT 6.9 0.0069 Cb medulloblastoma TCTGTCCTGA (4) 6.9 0.0069 Cb medulloblastoma TTTTAGTGGA (4) 2.3 0.0023 P8 GC+1d culture AGTTAAGCAT 6.8 0.0068 P8 GC+1d culture AATAAAGCCA (3) 2.3 0.0023 P8 GC+1d culture TTTCCAACTA 2.3 0.0023 P8 GC+1d culture CCCTGGCCTT (6) 1.1 0.0011 P8 GC+1d culture GGCCGCCTCA (3) 1.1 0.0011 P8 GC+1d culture TGAGGAGGAG (5) 1.1 0.0011 P8 GC+1d culture TTTTAGTGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture AGTTAAGCAT 4.7 0.0047 P8 GC+SHH+1d culture AATAAAGCCA (3) 3.5 0.0035 P8 GC+SHH+1d culture TGAGGAGGAG (5) 2.3 0.0023 P8 GC+SHH+1d culture TTTCCAACTA 2.3 0.0023 P8 GC+SHH+1d culture GGCCGCCTCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTCCTGA (4) 1.2 0.0012 3T3 fibroblasts CCCTGGCCTT (6) 7 0.007 P1 cortex AATAAAGCCA (3) 9.1 0.0091 P1 cortex AGTTAAGCAT 4.5 0.0045 P1 cortex TGAGGAGGAG (5) 4.5 0.0045 P1 cortex TGATACAATG (3) 4.5 0.0045 Hypothalamus AATAAAGCCA (3) 85.1 0.0851 Hypothalamus AGTTAAGCAT 5.4 0.0054 Hypothalamus GGCCGCCTCA (3) 3.6 0.0036 Hypothalamus TCTGTCCTGA (4) 1.8 0.0018 Hypothalamus TGATACAATG (3) 1.8 0.0018 E12.5 retina AATAAAGCCA (3) 11.3 0.0113 E12.5 retina AGTTAAGCAT 3.8 0.0038 E12.5 retina CACACACCCC (3) 1.9 0.0019 E12.5 retina TGAGGAGGAG (5) 1.9 0.0019 E14.5 retina AGTTAAGCAT 5.5 0.0055 E14.5 retina GGCCGCCTCA (3) 3.6 0.0036 E16.5 retina GGCCGCCTCA (3) 3.6 0.0036 E16.5 retina AATAAAGCCA (3) 1.8 0.0018 E16.5 retina AGTTAAGCAT 1.8 0.0018 E16.5 retina CACACACCCC (3) 1.8 0.0018 E16.5 retina TCTGTCCTGA (4) 1.8 0.0018 E16.5 retina TGAGGAGGAG (5) 1.8 0.0018 E18.5 retina AATAAAGCCA (3) 14.6 0.0146 E18.5 retina CACACACCCC (3) 1.8 0.0018 P0.5 retina AATAAAGCCA (3) 3.9 0.0039 P0.5 retina AGTTAAGCAT 3.9 0.0039 P0.5 retina TCTGTCCTGA (4) 3.9 0.0039 P0.5 retina GGCCGCCTCA (3) 2 0.002 P0.5 retina TGAGGAGGAG (5) 2 0.002 P0.5 retina TGATACAATG (3) 2 0.002 P2.5 retina TCTGTCCTGA (4) 12.3 0.0123 P2.5 retina AATAAAGCCA (3) 8.8 0.0088 P2.5 retina AGTTAAGCAT 3.5 0.0035 P2.5 retina GGCCGCCTCA (3) 1.8 0.0018 P4.5 retina AATAAAGCCA (3) 33.7 0.0337 P4.5 retina TCTGTCCTGA (4) 11.9 0.0119 P4.5 retina AGTTAAGCAT 4 0.004 P4.5 retina TGAGGAGGAG (5) 4 0.004 P6.5 retina AATAAAGCCA (3) 51.7 0.0517 P6.5 retina TCTGTCCTGA (4) 5 0.005 P6.5 retina AGTTAAGCAT 3.3 0.0033 P6.5 retina TGAGGAGGAG (5) 3.3 0.0033 P10.5 crx- retina AATAAAGCCA (3) 91 0.091 P10.5 crx- retina AGTTAAGCAT 13 0.013 P10.5 crx- retina TGAGGAGGAG (5) 1.9 0.0019 P10.5 crx- retina TTTCCAACTA 1.9 0.0019 P10.5 crx+ retina AATAAAGCCA (3) 57.7 0.0577 P10.5 crx+ retina TTTCCAACTA 5.8 0.0058 Adult retinal AATAAAGCCA (3) 63 0.063 Adult retinal AGTTAAGCAT 5.6 0.0056 Adult retinal GGCCGCCTCA (3) 1.9 0.0019 Adult retinal TCTGTCCTGA (4) 1.9 0.0019 Adult retinal TGAGGAGGAG (5) 1.9 0.0019 ONL AATAAAGCCA (3) 40.2 0.0402 ONL CACACACCCC (3) 3.8 0.0038 ONL AGTTAAGCAT 1.9 0.0019 ONL TTTTAGTGGA (4) 1.9 0.0019