Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275195	Ubr1	ubiquitin protein ligase E3 component n-recognin 1	2	2 67.4 cM	22222
Gene Ontology	intracellular | ligase activity | protein binding | protein biosynthesis | ribosome | structural constituent of ribosome | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin ligase complex | ubiquitin-dependent protein catabolism | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity | ubiquitin-protein ligase activity
Human Homolog	UBR1[ubiquitin protein ligase E3 component n-recognin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAAGTTAT 4.9 0.0049 Cb medulloblastoma ATGAAGTTAT TAAACATCTT (2) 4.6 0.0046 P8 GC+1d culture ATGAAGTTAT TAAACATCTT (2) 6.8 0.0068 P8 GC+SHH+1d culture ATGAAGTTAT TAAACATCTT (2) 9.4 0.0094 Hypothalamus GGGGGTCACA 3.6 0.0036 E12.5 retina TTGCAGTCAC 1.9 0.0019 E14.5 retina ATGAAGTTAT 3.6 0.0036 E16.5 retina ATGAAGTTAT TTGCAGTCAC 7.2 0.0072 E18.5 retina ATGAAGTTAT 1.8 0.0018 P0.5 retina GGGGGTCACA 2 0.002 P2.5 retina ATGAAGTTAT TTGCAGTCAC 3.6 0.0036 P4.5 retina ATGAAGTTAT TAAACATCTT (2) 6 0.006 P6.5 retina TAAACATCTT (2) 1.7 0.0017 P10.5 crx- retina ATGAAGTTAT TTGCAGTCAC 5.6 0.0056 P10.5 crx+ retina TAAACATCTT (2) 1.9 0.0019 Adult retinal ATGAAGTTAT GGGGGTCACA TAAACATCTT (2) 7.5 0.0075 ONL ATGAAGTTAT 3.8 0.0038