Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275266	B430007K19Rik	RIKEN cDNA B430007K19 gene	9		320708
Mm.275266	AU019857	expressed sequence AU019857	9		102669
Mm.275266	Arhgef12	Rho guanine nucleotide exchange factor (GEF) 12	9		69632
Gene Ontology	GTPase activator activity | guanyl-nucleotide exchange factor activity | intracellular signaling cascade | protein binding | signal transducer activity
Human Homolog	ARHGEF12[Rho guanine nucleotide exchange factor (GEF) 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ATCTACAAAA (4) 4.9 0.0049 P8 Cb GC AAGGAGAGTT (4) 1.6 0.0016 P8 Cb GC TACCCCAGGC (6) 1.6 0.0016 P8 Cb GC TATTTTTACT (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GTGACGCACG (4) 4.6 0.0046 Cb medulloblastoma TATTTTTACT (3) 4.6 0.0046 Cb medulloblastoma AAGGAGAGTT (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GCAACCTCCC (8) 5.7 0.0057 P8 GC+1d culture ATCTACAAAA (4) 2.3 0.0023 P8 GC+1d culture TATTTTTACT (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GCAACCTCCC (8) 8.2 0.0082 P8 GC+SHH+1d culture ATCTACAAAA (4) 5.9 0.0059 P8 GC+SHH+1d culture ATCCTGACCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGCCAC (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AAGGAGAGTT (4) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGTGCTGAGG (4) 7 0.007 3T3 fibroblasts GTGACGCACG (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTGCTGCCAC (6) 4.9 0.0049 E15 cortex GCAACCTCCC (8) 4.9 0.0049 E15 cortex GGTGCTGAGG (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAGGAGAGTT (4) 4.5 0.0045 P1 cortex ATCTACAAAA (4) 4.5 0.0045 P1 cortex GCAACCTCCC (8) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AGTATTTTTT (4) 1.8 0.0018 Hypothalamus TACCCCAGGC (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATCTACAAAA (4) 3.8 0.0038 E12.5 retina AAATCAAGAG (3) 1.9 0.0019 E12.5 retina GCAACCTCCC (8) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATCTACAAAA (4) 3.6 0.0036 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ATCTACAAAA (4) 5.4 0.0054 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ATCTACAAAA (4) 9.1 0.0091 E18.5 retina AAGGAGAGTT (4) 1.8 0.0018 E18.5 retina CTGCTGCCAC (6) 1.8 0.0018 E18.5 retina TACCCCAGGC (6) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAGGAGAGTT (4) 2 0.002 P0.5 retina ATCTACAAAA (4) 2 0.002 P0.5 retina TATTTTTACT (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ATCTACAAAA (4) 10.6 0.0106 P2.5 retina AAGGAGAGTT (4) 3.5 0.0035 P2.5 retina GGTGCTGAGG (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TATTTTTACT (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATCTACAAAA (4) 7.9 0.0079 P4.5 retina GGTGCTGAGG (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TATTTTTACT (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATCTACAAAA (4) 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AAGGAGAGTT (4) 1.7 0.0017 P6.5 retina AGTATTTTTT (4) 1.7 0.0017 P6.5 retina GTGACGCACG (4) 1.7 0.0017 P6.5 retina TATTTTTACT (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ATCTACAAAA (4) 3.7 0.0037 P10.5 crx- retina GTGACGCACG (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ATCTACAAAA (4) 3.8 0.0038 P10.5 crx+ retina AGTATTTTTT (4) 1.9 0.0019 P10.5 crx+ retina GTGACGCACG (4) 1.9 0.0019 P10.5 crx+ retina TATTTTTACT (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ATCCTGACCC (3) 3.7 0.0037 Adult retinal AAGGAGAGTT (4) 1.9 0.0019 Adult retinal ATCTACAAAA (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TATTTTTACT (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATCTACAAAA (4) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAATCAAGAG (3) 3.8 0.0038 ONL AAGGAGAGTT (4) 1.9 0.0019 ONL GTGACGCACG (4) 1.9 0.0019 ONL TATTTTTACT (3) 1.9 0.0019