Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275272	Letmd1	LETM1 domain containing 1	15	15 F1	68614
Gene Ontology	extracellular space | integral to membrane | receptor activity
Human Homolog	LETMD1[LETM1 domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTTGTTT (4) 13.1 0.0131 P8 Cb GC AAGCACTGGT 4.9 0.0049 P8 Cb GC GCTTCAGCTT (3) 1.6 0.0016 P8 Cb GC GTTTTGTTTT (8) 1.6 0.0016 Cb medulloblastoma GCTTCAGCTT (3) 4.6 0.0046 Cb medulloblastoma GGTTTTGTTT (4) 4.6 0.0046 Cb medulloblastoma CCTGGCACTG (2) 2.3 0.0023 P8 GC+1d culture CCTGGCACTG (2) 6.8 0.0068 P8 GC+1d culture GCTTCAGCTT (3) 3.4 0.0034 P8 GC+1d culture AAGCACTGGT 1.1 0.0011 P8 GC+1d culture GGTTTTGTTT (4) 1.1 0.0011 P8 GC+1d culture TAAGGTCCCT 1.1 0.0011 P8 GC+SHH+1d culture AAGCACTGGT 7 0.007 P8 GC+SHH+1d culture GGTTTTGTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture GCTTCAGCTT (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCTAACTTC 2.3 0.0023 P8 GC+SHH+1d culture GTTTTGTTTT (8) 2.3 0.0023 P8 GC+SHH+1d culture GGGTGGCTCA (9) 1.2 0.0012 E15 cortex CCTGGCACTG (2) 9.9 0.0099 E15 cortex GGTTTTGTTT (4) 9.9 0.0099 P1 cortex GGTTTTGTTT (4) 18.2 0.0182 P1 cortex CCTGGCACTG (2) 4.5 0.0045 Hypothalamus AAGCACTGGT 5.4 0.0054 Hypothalamus CCTGGCACTG (2) 5.4 0.0054 Hypothalamus GCTTCAGCTT (3) 1.8 0.0018 Hypothalamus GGCTAACTTC 1.8 0.0018 E12.5 retina AAGCACTGGT 3.8 0.0038 E12.5 retina GGTTTTGTTT (4) 3.8 0.0038 E12.5 retina GTTTTGTTTT (8) 3.8 0.0038 E12.5 retina CCTGGCACTG (2) 1.9 0.0019 E12.5 retina TAAGGTCCCT 1.9 0.0019 E14.5 retina GGTTTTGTTT (4) 7.3 0.0073 E14.5 retina AAGCACTGGT 5.5 0.0055 E14.5 retina GCTTCAGCTT (3) 3.6 0.0036 E14.5 retina CCTGGCACTG (2) 1.8 0.0018 E16.5 retina AAGCACTGGT 16.3 0.0163 E16.5 retina GGTTTTGTTT (4) 9.1 0.0091 E16.5 retina TAAGGTCCCT 3.6 0.0036 E16.5 retina CCTGGCACTG (2) 1.8 0.0018 E16.5 retina GCTTCAGCTT (3) 1.8 0.0018 E18.5 retina AAGCACTGGT 10.9 0.0109 E18.5 retina GGTTTTGTTT (4) 3.6 0.0036 E18.5 retina GGGTGGCTCA (9) 1.8 0.0018 P0.5 retina GGTTTTGTTT (4) 11.8 0.0118 P0.5 retina CCTGGCACTG (2) 5.9 0.0059 P0.5 retina AAGCACTGGT 2 0.002 P2.5 retina AAGCACTGGT 17.6 0.0176 P2.5 retina GGTTTTGTTT (4) 10.6 0.0106 P2.5 retina CCTGGCACTG (2) 3.5 0.0035 P2.5 retina TAAGGTCCCT 3.5 0.0035 P2.5 retina GGCTAACTTC 1.8 0.0018 P4.5 retina AAGCACTGGT 9.9 0.0099 P4.5 retina CCTGGCACTG (2) 4 0.004 P4.5 retina GCTTCAGCTT (3) 2 0.002 P4.5 retina GGCTAACTTC 2 0.002 P4.5 retina GGGTGGCTCA (9) 2 0.002 P4.5 retina GGTTTTGTTT (4) 2 0.002 P6.5 retina AAGCACTGGT 15 0.015 P6.5 retina GGTTTTGTTT (4) 8.3 0.0083 P6.5 retina CCTGGCACTG (2) 6.7 0.0067 P6.5 retina GTTTTGTTTT (8) 3.3 0.0033 P6.5 retina TAAGGTCCCT 3.3 0.0033 P6.5 retina GCTTCAGCTT (3) 1.7 0.0017 P10.5 crx- retina CCTGGCACTG (2) 18.6 0.0186 P10.5 crx- retina GGTTTTGTTT (4) 14.9 0.0149 P10.5 crx- retina AAGCACTGGT 5.6 0.0056 P10.5 crx- retina GCTTCAGCTT (3) 3.7 0.0037 P10.5 crx+ retina AAGCACTGGT 7.7 0.0077 P10.5 crx+ retina GGTTTTGTTT (4) 5.8 0.0058 P10.5 crx+ retina CCTGGCACTG (2) 3.8 0.0038 P10.5 crx+ retina GCTTCAGCTT (3) 3.8 0.0038 P10.5 crx+ retina GGGTGGCTCA (9) 1.9 0.0019 Adult retinal CCTGGCACTG (2) 33.3 0.0333 Adult retinal GCTTCAGCTT (3) 3.7 0.0037 Adult retinal AAGCACTGGT 1.9 0.0019 Adult retinal GGGTGGCTCA (9) 1.9 0.0019 Adult retinal GTTTTGTTTT (8) 1.9 0.0019 ONL CCTGGCACTG (2) 23 0.023 ONL GTTTTGTTTT (8) 5.7 0.0057 ONL AAGCACTGGT 3.8 0.0038 ONL GCTTCAGCTT (3) 1.9 0.0019 ONL GGGTGGCTCA (9) 1.9 0.0019 ONL GGTTTTGTTT (4) 1.9 0.0019