Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275281	Narg1	NMDA receptor-regulated gene 1	3		74838
Gene Ontology	cytoplasm | N-acetyltransferase activity | protein binding | receptor activity | transferase activity
Human Homolog	TBDN100[transcriptional coactivator tubedown-100]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGAACAAA (7) 3.3 0.0033 P8 Cb GC GAGAAACCCT (8) 3.3 0.0033 P8 Cb GC AAATGGCTGT (2) 1.6 0.0016 P8 Cb GC AGTTATTTTG 1.6 0.0016 P8 Cb GC ATCAGTTGGG (3) 1.6 0.0016 P8 Cb GC GCTTGAAGTT 1.6 0.0016 P8 Cb GC GGCCAGTTCT (6) 1.6 0.0016 P8 Cb GC TACTATGAAA (3) 1.6 0.0016 Cb medulloblastoma GGCCAGTTCT (6) 18.5 0.0185 Cb medulloblastoma GAGAAACCCT (8) 4.6 0.0046 Cb medulloblastoma TCTCATTGAA (2) 2.3 0.0023 Cb medulloblastoma TCTGACAAAG (4) 2.3 0.0023 P8 GC+1d culture AGTTATTTTG 8 0.008 P8 GC+1d culture GGCCAGTTCT (6) 8 0.008 P8 GC+1d culture CAAGAACAAA (7) 1.1 0.0011 P8 GC+1d culture GCTTGAAGTT 1.1 0.0011 P8 GC+1d culture TTAAAAGCCA (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCCAGTTCT (6) 3.5 0.0035 P8 GC+SHH+1d culture TTAAAAGCCA (2) 2.3 0.0023 P8 GC+SHH+1d culture AAATGGCTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture AGTTATTTTG 1.2 0.0012 P8 GC+SHH+1d culture CCTCCTGGAT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTGGTAATT (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTTGAAGTT 1.2 0.0012 P8 GC+SHH+1d culture TCTGACAAAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTAACTA (2) 1.2 0.0012 3T3 fibroblasts ATCAGTTGGG (3) 7 0.007 3T3 fibroblasts CCTCCTGGAT (3) 3.5 0.0035 3T3 fibroblasts GCTTGAAGTT 3.5 0.0035 3T3 fibroblasts GGCCAGTTCT (6) 3.5 0.0035 3T3 fibroblasts TTAAAAGCCA (2) 3.5 0.0035 E15 cortex CAAGAACAAA (7) 4.9 0.0049 E15 cortex CCTCCTGGAT (3) 4.9 0.0049 P1 cortex AAATGGCTGT (2) 4.5 0.0045 P1 cortex CCTCCTGGAT (3) 4.5 0.0045 P1 cortex GAGAAACCCT (8) 4.5 0.0045 P1 cortex TCTGACAAAG (4) 4.5 0.0045 Hypothalamus GAGAAACCCT (8) 3.6 0.0036 Hypothalamus CCATTGGTTT (2) 1.8 0.0018 Hypothalamus GCTTGAAGTT 1.8 0.0018 Hypothalamus GGCCAGTTCT (6) 1.8 0.0018 Hypothalamus TCTCATTGAA (2) 1.8 0.0018 Hypothalamus TCTGACAAAG (4) 1.8 0.0018 E12.5 retina AGTTATTTTG 5.6 0.0056 E12.5 retina CCTCCTGGAT (3) 1.9 0.0019 E12.5 retina GAGAAACCCT (8) 1.9 0.0019 E12.5 retina GGCCAGTTCT (6) 1.9 0.0019 E12.5 retina TCTGACAAAG (4) 1.9 0.0019 E14.5 retina AGTTATTTTG 9.1 0.0091 E14.5 retina GAGAAACCCT (8) 3.6 0.0036 E14.5 retina GCTTGAAGTT 1.8 0.0018 E14.5 retina GGCCAGTTCT (6) 1.8 0.0018 E14.5 retina TCTGACAAAG (4) 1.8 0.0018 E14.5 retina TTAAAAGCCA (2) 1.8 0.0018 E16.5 retina AGTTATTTTG 3.6 0.0036 E16.5 retina GAGAAACCCT (8) 3.6 0.0036 E16.5 retina TTTTTAACTA (2) 3.6 0.0036 E16.5 retina CAAGAACAAA (7) 1.8 0.0018 E16.5 retina CCATTGGTTT (2) 1.8 0.0018 E16.5 retina TTAAAAGCCA (2) 1.8 0.0018 E18.5 retina AGTTATTTTG 3.6 0.0036 E18.5 retina CAAGAACAAA (7) 1.8 0.0018 E18.5 retina GAGAAACCCT (8) 1.8 0.0018 E18.5 retina GGCCAGTTCT (6) 1.8 0.0018 E18.5 retina TCTGACAAAG (4) 1.8 0.0018 E18.5 retina TTAAAAGCCA (2) 1.8 0.0018 P0.5 retina GCTTGAAGTT 5.9 0.0059 P0.5 retina TTAAAAGCCA (2) 3.9 0.0039 P0.5 retina AGTTATTTTG 2 0.002 P0.5 retina GAGAAACCCT (8) 2 0.002 P2.5 retina GAGAAACCCT (8) 8.8 0.0088 P2.5 retina AGTTATTTTG 5.3 0.0053 P2.5 retina TTAAAAGCCA (2) 3.5 0.0035 P2.5 retina GCTTGAAGTT 1.8 0.0018 P4.5 retina AGTTATTTTG 7.9 0.0079 P4.5 retina GAGAAACCCT (8) 5.9 0.0059 P4.5 retina CTTGGTAATT (3) 2 0.002 P4.5 retina TCTCATTGAA (2) 2 0.002 P4.5 retina TTAAAAGCCA (2) 2 0.002 P6.5 retina AGTTATTTTG 3.3 0.0033 P6.5 retina GAGAAACCCT (8) 3.3 0.0033 P6.5 retina CCATTGGTTT (2) 1.7 0.0017 P6.5 retina TTAAAAGCCA (2) 1.7 0.0017 P10.5 crx- retina AGTTATTTTG 9.3 0.0093 P10.5 crx- retina GCTTGAAGTT 5.6 0.0056 P10.5 crx- retina GGCCAGTTCT (6) 3.7 0.0037 P10.5 crx- retina TACTATGAAA (3) 3.7 0.0037 P10.5 crx- retina TTAAAAGCCA (2) 3.7 0.0037 P10.5 crx- retina CAAGAACAAA (7) 1.9 0.0019 P10.5 crx- retina GAGAAACCCT (8) 1.9 0.0019 P10.5 crx+ retina TTAAAAGCCA (2) 5.8 0.0058 P10.5 crx+ retina AGTTATTTTG 3.8 0.0038 P10.5 crx+ retina CTTGGTAATT (3) 3.8 0.0038 P10.5 crx+ retina GAGAAACCCT (8) 3.8 0.0038 P10.5 crx+ retina CAAGAACAAA (7) 1.9 0.0019 P10.5 crx+ retina GCTTGAAGTT 1.9 0.0019 P10.5 crx+ retina GGCCAGTTCT (6) 1.9 0.0019 P10.5 crx+ retina TCTGACAAAG (4) 1.9 0.0019 Adult retinal TTAAAAGCCA (2) 1.9 0.0019 ONL GAGAAACCCT (8) 5.7 0.0057 ONL AGTTATTTTG 3.8 0.0038 ONL GGCCAGTTCT (6) 1.9 0.0019 ONL TTTTTAACTA (2) 1.9 0.0019