Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275332	Apg7l	autophagy 7-like (S. cerevisiae)	6		74244
Gene Ontology	autophagy | protein binding | ubiquitin activating enzyme activity
Human Homolog	APG7L[APG7 autophagy 7-like (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTCTGTGT GAGTAACTGT GTTTGCCTGA (3) TCCTCAAAAA TCTCAAAAAA (3) TGTCTGCCTG (3) 14.6 0.0146 Cb medulloblastoma GAGTAACTGT TCCTCAAAAA TCTCAAAAAA (3) TGTCTGCCTG (3) 18.4 0.0184 P8 GC+1d culture CCACCCTAGG GAGATGGGGT (2) GAGTAACTGT GCTTGTGACT GTTTGCCTGA (3) TCTCAAAAAA (3) TGTGCCTGCA 11.2 0.0112 P8 GC+SHH+1d culture ACAACACTGC AGTGACGAGG GAGATGGGGT (2) GAGTAACTGT TCTCAAAAAA (3) 10.5 0.0105 3T3 fibroblasts GAGATGGGGT (2) GTTTGCCTGA (3) TGTCTGCCTG (3) 17.5 0.0175 E15 cortex ACAACACTGC CTGTCTGTGT GTTTGCCTGA (3) TCTCAAAAGA (2) TGTGCCTGCA 29.5 0.0295 P1 cortex GTTTGCCTGA (3) TCTCAAAAGA (2) TGTGCCTGCA 13.5 0.0135 Hypothalamus CCACCCTAGG GGGGCCAGAT TCTCAAAAAA (3) 9 0.009 E12.5 retina CCACCCTAGG 1.9 0.0019 E14.5 retina CTGTCTGTGT GAGTAACTGT GTTTGCCTGA (3) TCTCAAAAAA (3) 10.8 0.0108 E16.5 retina AGTGACGAGG CCACCCTAGG GAGATGGGGT (2) TCTCAAAAAA (3) TGTCTGCCTG (3) TGTGCCTGCA 12.6 0.0126 E18.5 retina CTGTCTGTGT GAGTAACTGT GTTTGCCTGA (3) TCCTCAAAAA TCTCAAAAAA (3) TCTCAAACAA TGTCTGCCTG (3) TGTGCCTGCA 18.1 0.0181 P0.5 retina GGGGCCAGAT GTTTGCCTGA (3) TGTGCCTGCA 6 0.006 P2.5 retina GAGTAACTGT GCTTGTGACT GGGGCCAGAT GTTTGCCTGA (3) TCCTCAAAAA TCTCAAAAAA (3) TCTCAAAAGA (2) 12.6 0.0126 P4.5 retina AGTGACGAGG GTTTGCCTGA (3) TCCTCAAAAA TCTCAAAAAA (3) TGTCTGCCTG (3) TGTGCCTGCA 12 0.012 P6.5 retina ACAACACTGC GAGTAACTGT GCTTGTGACT TCCCAGCATC TCTCAAAAAA (3) TCTCAAAAGA (2) TCTCAAACAA 13.5 0.0135 P10.5 crx- retina GAGTAACTGT GTTTGCCTGA (3) TCTCAAACAA 5.7 0.0057 P10.5 crx+ retina CCACCCTAGG GTTTGCCTGA (3) TCTCAAAAAA (3) TGTGCCTGCA 13.3 0.0133 Adult retinal AGTGACGAGG TCCCAGCATC TCTCAAAAAA (3) TCTCAAAAGA (2) 55.6 0.0556 ONL GAGATGGGGT (2) TCCCAGCATC TCTCAAAAAA (3) 38.3 0.0383