Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275340	Ssh1	slingshot homolog 1 (Drosophila)	5		231637
Human Homolog	SSH1[slingshot homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 Cb medulloblastoma GGCCTTGACT (6) 6.9 0.0069 Cb medulloblastoma CCAGGGAAGA (4) 2.3 0.0023 Cb medulloblastoma GAGAAAATAG (2) 2.3 0.0023 P8 GC+1d culture GAGAAAATAG (2) 2.3 0.0023 P8 GC+1d culture GGGTACAGCT 2.3 0.0023 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture GGGGTGAGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture CCAGGGAAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture GAGAAAATAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTGAGGA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGTACAGCT 1.2 0.0012 E15 cortex GAGAAAATAG (2) 4.9 0.0049 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 Hypothalamus GGCCTTGACT (6) 18.1 0.0181 Hypothalamus GAGAAAATAG (2) 1.8 0.0018 E12.5 retina CCAGGGAAGA (4) 3.8 0.0038 E12.5 retina GAGAAAATAG (2) 3.8 0.0038 E12.5 retina GGCCTTGACT (6) 1.9 0.0019 E12.5 retina GGGGTGAGGA (4) 1.9 0.0019 E14.5 retina GAGAAAATAG (2) 7.3 0.0073 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E16.5 retina GAGAAAATAG (2) 7.2 0.0072 E16.5 retina CCAGGGAAGA (4) 1.8 0.0018 E16.5 retina GGCCTTGACT (6) 1.8 0.0018 E16.5 retina GGGTACAGCT 1.8 0.0018 E18.5 retina GAGAAAATAG (2) 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina GGCCTTGACT (6) 1.8 0.0018 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina CTGGTCTCTC (6) 2 0.002 P0.5 retina GAGAAAATAG (2) 2 0.002 P2.5 retina GAGAAAATAG (2) 5.3 0.0053 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina GGGTACAGCT 1.8 0.0018 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina CTGGTCTCTC (6) 2 0.002 P4.5 retina GAGAAAATAG (2) 2 0.002 P6.5 retina GAGAAAATAG (2) 5 0.005 P10.5 crx- retina GAGAAAATAG (2) 3.7 0.0037 P10.5 crx- retina GGCCTTGACT (6) 1.9 0.0019 P10.5 crx- retina GGGTACAGCT 1.9 0.0019 Adult retinal GGCCTTGACT (6) 3.7 0.0037 Adult retinal CTGGTCTCTC (6) 1.9 0.0019 Adult retinal GAGAAAATAG (2) 1.9 0.0019 ONL CTGGTCTCTC (6) 1.9 0.0019 ONL GAGAAAATAG (2) 1.9 0.0019