Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27545	Hrmt1l2-rs	heterogeneous nuclear ribonucleoproteins methyltransferase-like 2 (S. cerevisiae), related sequence	18	18 2.0 cM	93844
Mm.27545	Hrmt1l2	heterogeneous nuclear ribonucleoproteins methyltransferase-like 2 (S. cerevisiae)	7	7 23.1 cM	15469
Gene Ontology	methyltransferase activity | nucleus | organogenesis | protein methyltransferase activity | ribonucleoprotein complex | RNA processing | S-adenosylmethionine-dependent methyltransferase activity | transferase activity | viral nucleocapsid
Human Homolog	HRMT1L2[HMT1 hnRNP methyltransferase-like 2 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGACTACC (2) 4.9 0.0049 P8 Cb GC GTCAGCTGAG (2) 4.9 0.0049 P8 Cb GC AGTTGAAGGG (3) 3.3 0.0033 P8 Cb GC AAAAGAAAAA (3) 1.6 0.0016 P8 Cb GC GGATGAGGCC (2) 1.6 0.0016 P8 Cb GC TAGAACACAG (2) 1.6 0.0016 P8 Cb GC TTCGCTGCCA (7) 1.6 0.0016 Cb medulloblastoma AAAAGAAAAA (3) 11.6 0.0116 Cb medulloblastoma GTCAACACCG (2) 2.3 0.0023 Cb medulloblastoma TTCGCTGCCA (7) 2.3 0.0023 P8 GC+1d culture GTCAACACCG (2) 4.6 0.0046 P8 GC+1d culture GAGGACTACC (2) 3.4 0.0034 P8 GC+1d culture GTCAGCTGAG (2) 3.4 0.0034 P8 GC+1d culture AAAAGAAAAA (3) 1.1 0.0011 P8 GC+1d culture TTCGCTGCCA (7) 1.1 0.0011 P8 GC+SHH+1d culture AAAAGAAAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture TTCGCTGCCA (7) 3.5 0.0035 P8 GC+SHH+1d culture GTCAGCTGAG (2) 1.2 0.0012 3T3 fibroblasts GTCAACACCG (2) 3.5 0.0035 Hypothalamus TTCGCTGCCA (7) 5.4 0.0054 Hypothalamus AGTTGAAGGG (3) 1.8 0.0018 E12.5 retina GAGGACTACC (2) 5.6 0.0056 E12.5 retina GGATGAGGCC (2) 3.8 0.0038 E12.5 retina TTCGCTGCCA (7) 3.8 0.0038 E12.5 retina GTCAGCTGAG (2) 1.9 0.0019 E14.5 retina GTCAGCTGAG (2) 3.6 0.0036 E14.5 retina GAGGACTACC (2) 1.8 0.0018 E14.5 retina TTCGCTGCCA (7) 1.8 0.0018 E16.5 retina GTCAGCTGAG (2) 5.4 0.0054 E16.5 retina TTCGCTGCCA (7) 3.6 0.0036 E16.5 retina AGTTGAAGGG (3) 1.8 0.0018 E18.5 retina AAAAGAAAAA (3) 5.5 0.0055 E18.5 retina GAGGACTACC (2) 5.5 0.0055 E18.5 retina GTCAGCTGAG (2) 1.8 0.0018 P0.5 retina GAGGACTACC (2) 7.9 0.0079 P0.5 retina TTCGCTGCCA (7) 3.9 0.0039 P0.5 retina GTCAACACCG (2) 2 0.002 P0.5 retina TAGAACACAG (2) 2 0.002 P2.5 retina GAGGACTACC (2) 5.3 0.0053 P2.5 retina TTCGCTGCCA (7) 5.3 0.0053 P2.5 retina AAAAGAAAAA (3) 3.5 0.0035 P2.5 retina AGTTGAAGGG (3) 1.8 0.0018 P2.5 retina GTCAGCTGAG (2) 1.8 0.0018 P4.5 retina AAAAGAAAAA (3) 9.9 0.0099 P4.5 retina GTCAGCTGAG (2) 5.9 0.0059 P4.5 retina TTCGCTGCCA (7) 5.9 0.0059 P4.5 retina GAGGACTACC (2) 2 0.002 P6.5 retina TTCGCTGCCA (7) 8.3 0.0083 P6.5 retina GTCAGCTGAG (2) 3.3 0.0033 P6.5 retina GAGGACTACC (2) 1.7 0.0017 P10.5 crx- retina GAGGACTACC (2) 7.4 0.0074 P10.5 crx- retina TTCGCTGCCA (7) 5.6 0.0056 P10.5 crx- retina AAAAGAAAAA (3) 1.9 0.0019 P10.5 crx- retina TAGAACACAG (2) 1.9 0.0019 P10.5 crx+ retina GAGGACTACC (2) 3.8 0.0038 P10.5 crx+ retina GTCAGCTGAG (2) 3.8 0.0038 P10.5 crx+ retina AAAAGAAAAA (3) 1.9 0.0019 P10.5 crx+ retina GTCAACACCG (2) 1.9 0.0019 P10.5 crx+ retina TTCGCTGCCA (7) 1.9 0.0019 Adult retinal GTCAGCTGAG (2) 3.7 0.0037 Adult retinal AAAAGAAAAA (3) 1.9 0.0019 ONL AAAAGAAAAA (3) 5.7 0.0057