Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275554	1100001D10Rik	RIKEN cDNA 1100001D10 gene	5		68420
Human Homolog	ANKRD13[ankyrin repeat domain 13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTTCCGTG (16) 4.9 0.0049 P8 Cb GC CAGTTTGCCA (4) 3.3 0.0033 P8 Cb GC TCTGCCTGCA (8) 3.3 0.0033 P8 Cb GC CCAGTGAGGC 1.6 0.0016 P8 Cb GC CCTTTTACCC (3) 1.6 0.0016 P8 Cb GC GAAAGACCAA (3) 1.6 0.0016 P8 Cb GC TGATGAAGCA (3) 1.6 0.0016 Cb medulloblastoma TCTGCCTGCA (8) 27.7 0.0277 Cb medulloblastoma AGGCAGTGCA (2) 6.9 0.0069 Cb medulloblastoma GCCTTCCGTG (16) 6.9 0.0069 Cb medulloblastoma TGATGAAGCA (3) 4.6 0.0046 P8 GC+1d culture CCTTTTACCC (3) 8 0.008 P8 GC+1d culture TCTGCCTGCA (8) 4.6 0.0046 P8 GC+1d culture GCCTTCCGTG (16) 1.1 0.0011 P8 GC+SHH+1d culture TCTGCCTGCA (8) 8.2 0.0082 P8 GC+SHH+1d culture CCTTTTACCC (3) 7 0.007 P8 GC+SHH+1d culture GCCTTCCGTG (16) 2.3 0.0023 P8 GC+SHH+1d culture CCAGTGAGGC 1.2 0.0012 3T3 fibroblasts CCTTTTACCC (3) 3.5 0.0035 3T3 fibroblasts GCCTTCCGTG (16) 3.5 0.0035 3T3 fibroblasts TGCAGATGAA (4) 3.5 0.0035 P1 cortex AGGCAGTGCA (2) 4.5 0.0045 Hypothalamus TCTGCCTGCA (8) 10.9 0.0109 Hypothalamus GCCTTCCGTG (16) 7.2 0.0072 Hypothalamus CCTTTTACCC (3) 3.6 0.0036 Hypothalamus CCAGTGAGGC 1.8 0.0018 Hypothalamus TGCAGATGAA (4) 1.8 0.0018 E12.5 retina CCTTTTACCC (3) 3.8 0.0038 E12.5 retina GAAAGACCAA (3) 3.8 0.0038 E12.5 retina TCTGCCTGCA (8) 1.9 0.0019 E14.5 retina TCTGCCTGCA (8) 7.3 0.0073 E16.5 retina AGGCAGTGCA (2) 5.4 0.0054 E16.5 retina GCCTTCCGTG (16) 5.4 0.0054 E16.5 retina TCTGCCTGCA (8) 3.6 0.0036 E16.5 retina GAGGGGCAGG (4) 1.8 0.0018 E18.5 retina AGGCAGTGCA (2) 3.6 0.0036 E18.5 retina GAAAGACCAA (3) 1.8 0.0018 E18.5 retina GCAGGCTCAC (4) 1.8 0.0018 P0.5 retina GCCTTCCGTG (16) 3.9 0.0039 P0.5 retina CCTTTTACCC (3) 2 0.002 P0.5 retina GCAGGCTCAC (4) 2 0.002 P0.5 retina TCTGCCTGCA (8) 2 0.002 P0.5 retina TGATGAAGCA (3) 2 0.002 P2.5 retina CAGTTTGCCA (4) 1.8 0.0018 P2.5 retina GAAAGACCAA (3) 1.8 0.0018 P2.5 retina TCTGCCTGCA (8) 1.8 0.0018 P4.5 retina TCTGCCTGCA (8) 5.9 0.0059 P4.5 retina AGGCAGTGCA (2) 2 0.002 P4.5 retina GAAAGACCAA (3) 2 0.002 P6.5 retina TCTGCCTGCA (8) 15 0.015 P6.5 retina GAAAGACCAA (3) 1.7 0.0017 P10.5 crx- retina GCCTTCCGTG (16) 5.6 0.0056 P10.5 crx- retina GCAGGCTCAC (4) 1.9 0.0019 P10.5 crx- retina TCTGCCTGCA (8) 1.9 0.0019 P10.5 crx- retina TGCAGATGAA (4) 1.9 0.0019 P10.5 crx+ retina TCTGCCTGCA (8) 21.1 0.0211 P10.5 crx+ retina TGATGAAGCA (3) 3.8 0.0038 P10.5 crx+ retina CCAGTGAGGC 1.9 0.0019 P10.5 crx+ retina GAAAGACCAA (3) 1.9 0.0019 P10.5 crx+ retina GCAGGCTCAC (4) 1.9 0.0019 Adult retinal TCTGCCTGCA (8) 11.1 0.0111 Adult retinal GCCTTCCGTG (16) 7.4 0.0074 Adult retinal CCTTTTACCC (3) 5.6 0.0056 Adult retinal AGGCAGTGCA (2) 3.7 0.0037 ONL TCTGCCTGCA (8) 9.6 0.0096 ONL GAAAGACCAA (3) 3.8 0.0038 ONL CCTTTTACCC (3) 1.9 0.0019 ONL GCCTTCCGTG (16) 1.9 0.0019