Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.2756 Hmgn1high mobility group nucleosomal binding domain 1 16  16 69.8 cM  15312 
 Gene Ontology chromatin | DNA binding | DNA packaging | nucleus
 Human Homolog HMGN1[high-mobility group nucleosome binding domain 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACCACAGACA
GCAGTCCATT
TAATAAAAAT
TACACAAATA
TACACAAATG (2)
43.90.0439
Cb medulloblastomaTAATAAAAAT
TTAATAAAAA (2)
11.50.0115
P8 GC+1d cultureACCACAGACA
GCAGTCCATT
GTTTTTTTAA (2)
TAATAAAAAT
TACACAAATG (2)
TTAATAAAAA (2)
37.50.0375
P8 GC+SHH+1d cultureACCACAGACA
AGCTGGGCAG (2)
TAATAAAAAT
TACACAAATG (2)
65.60.0656
3T3 fibroblastsAACACAATGT
AGCTGGGCAG (2)
10.50.0105
E15 cortexAGCTGGGCAG (2)
TAATAAAAAT
14.80.0148
P1 cortexTAATAAAAAT
4.50.0045
HypothalamusTAATAAAAAT
TACACAAATA
TACACAAATG (2)
12.60.0126
E12.5 retinaACCACAGACA
TAATAAAAAT
TACACAAATG (2)
TTAATAAAAA (2)
28.20.0282
E14.5 retinaAACACAATGT
TAATAAAAAT
TACACAAATG (2)
TTAATAAAAA (2)
820.082
E16.5 retinaGCAGTCCATT
TAATAAAAAT
TACACAAATG (2)
57.90.0579
E18.5 retinaACCACAGACA
TAATAAAAAT
TACACAAATG (2)
TTAATAAAAA (2)
81.80.0818
P0.5 retinaACCACAGACA
GCAGTCCATT
GTTTTTTTAA (2)
TAATAAAAAT
TACACAAATG (2)
17.70.0177
P2.5 retinaACCACAGACA
GCAGTCCATT
TAATAAAAAT
54.60.0546
P4.5 retinaAACACAATGT
ACCACAGACA
GCAGTCCATT
GTTTTTTTAA (2)
TAATAAAAAT
TTAATAAAAA (2)
35.80.0358
P6.5 retinaAACACAATGT
GTTTTTTTAA (2)
TAATAAAAAT
TACACAAATG (2)
TTAATAAAAA (2)
48.50.0485
P10.5 crx- retinaAACACAATGT
ACCACAGACA
GCAGTCCATT
TAATAAAAAT
TACACAAATG (2)
22.30.0223
P10.5 crx+ retinaAACACAATGT
ACCACAGACA
GCAGTCCATT
TAATAAAAAT
TACACAAATG (2)
460.046
Adult retinalACCACAGACA
GTTTTTTTAA (2)
TAATAAAAAT
TACACAAATA
260.026
ONLACCACAGACA
GCAGTCCATT
GTTTTTTTAA (2)
TAATAAAAAT
TACACAAATA
70.80.0708