Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27567
Tbc1d17
TBC1 domain family, member 17
7
233204
Human Homolog
IL4I1[interleukin 4 induced 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 84 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCTGAGTG
(
4
)
11.4
0.0114
P8 Cb GC
AGCCGGCCAA
(
2
)
6.5
0.0065
P8 Cb GC
GTGATAATGT (
2
)
6.5
0.0065
P8 Cb GC
GAGTTCAGGA (
5
)
3.3
0.0033
P8 Cb GC
CTCCGAAGGA (
3
)
1.6
0.0016
P8 Cb GC
GGAACTTTGA
(
3
)
1.6
0.0016
Cb medulloblastoma
AGCCGGCCAA
(
2
)
2.3
0.0023
Cb medulloblastoma
GGAACTTTGA
(
3
)
2.3
0.0023
P8 GC+1d culture
AAGCTGAGTG
(
4
)
19.4
0.0194
P8 GC+1d culture
AGCCGGCCAA
(
2
)
9.1
0.0091
P8 GC+1d culture
GGGGATCTGG (
6
)
5.7
0.0057
P8 GC+1d culture
GTGATAATGT (
2
)
5.7
0.0057
P8 GC+1d culture
CTGGCCTCAA
(
8
)
3.4
0.0034
P8 GC+1d culture
GGAACTTTGA
(
3
)
2.3
0.0023
P8 GC+1d culture
TCTTTAAAAA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGCTGAGTG
(
4
)
18.7
0.0187
P8 GC+SHH+1d culture
AGCCGGCCAA
(
2
)
7
0.007
P8 GC+SHH+1d culture
GTGATAATGT (
2
)
7
0.007
P8 GC+SHH+1d culture
TCTTTAAAAA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAACTTTGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGATCTGG (
6
)
1.2
0.0012
3T3 fibroblasts
AAGCTGAGTG
(
4
)
42.1
0.0421
3T3 fibroblasts
AGCCGGCCAA
(
2
)
7
0.007
E15 cortex
AAGCTGAGTG
(
4
)
9.9
0.0099
E15 cortex
GTGATAATGT (
2
)
9.9
0.0099
E15 cortex
AGCCGGCCAA
(
2
)
4.9
0.0049
P1 cortex
AAGCTGAGTG
(
4
)
13.6
0.0136
P1 cortex
AGCCGGCCAA
(
2
)
4.5
0.0045
P1 cortex
GTGATAATGT (
2
)
4.5
0.0045
Hypothalamus
AAGCTGAGTG
(
4
)
3.6
0.0036
Hypothalamus
CTGGCCTCAA
(
8
)
1.8
0.0018
E12.5 retina
AAGCTGAGTG
(
4
)
30
0.03
E12.5 retina
AGCCGGCCAA
(
2
)
3.8
0.0038
E12.5 retina
GGAACTTTGA
(
3
)
3.8
0.0038
E12.5 retina
GAGCTCAGGA
1.9
0.0019
E12.5 retina
TCTTTAAAAA (
7
)
1.9
0.0019
E14.5 retina
AAGCTGAGTG
(
4
)
7.3
0.0073
E14.5 retina
AGCCGGCCAA
(
2
)
5.5
0.0055
E14.5 retina
GTGATAATGT (
2
)
1.8
0.0018
E14.5 retina
TCTTTAAAAA (
7
)
1.8
0.0018
E16.5 retina
AAGCTGAGTG
(
4
)
18.1
0.0181
E16.5 retina
GGAACTTTGA
(
3
)
3.6
0.0036
E16.5 retina
CTGGCCTCAA
(
8
)
1.8
0.0018
E16.5 retina
GAGCTCAGGA
1.8
0.0018
E16.5 retina
GTGATAATGT (
2
)
1.8
0.0018
E16.5 retina
TCTTTAAAAA (
7
)
1.8
0.0018
E18.5 retina
AAGCTGAGTG
(
4
)
14.6
0.0146
E18.5 retina
AGCCGGCCAA
(
2
)
5.5
0.0055
E18.5 retina
GGAACTTTGA
(
3
)
1.8
0.0018
E18.5 retina
GTGATAATGT (
2
)
1.8
0.0018
P0.5 retina
AAGCTGAGTG
(
4
)
17.7
0.0177
P0.5 retina
AAAATGGAGC
(
4
)
7.9
0.0079
P0.5 retina
AGCCGGCCAA
(
2
)
2
0.002
P0.5 retina
GGAACTTTGA
(
3
)
2
0.002
P0.5 retina
GGGGATCTGG (
6
)
2
0.002
P2.5 retina
AAGCTGAGTG
(
4
)
12.3
0.0123
P2.5 retina
AGCCGGCCAA
(
2
)
8.8
0.0088
P2.5 retina
GGAACTTTGA
(
3
)
8.8
0.0088
P2.5 retina
TCTTTAAAAA (
7
)
5.3
0.0053
P2.5 retina
GAGCTCAGGA
3.5
0.0035
P2.5 retina
CTCCGAAGGA (
3
)
1.8
0.0018
P4.5 retina
AAGCTGAGTG
(
4
)
9.9
0.0099
P4.5 retina
AGCCGGCCAA
(
2
)
4
0.004
P4.5 retina
CTGGCCTCAA
(
8
)
2
0.002
P4.5 retina
GGGGATCTGG (
6
)
2
0.002
P4.5 retina
GTGATAATGT (
2
)
2
0.002
P4.5 retina
TCTTTAAAAA (
7
)
2
0.002
P6.5 retina
AAGCTGAGTG
(
4
)
16.7
0.0167
P6.5 retina
AGCCGGCCAA
(
2
)
11.7
0.0117
P6.5 retina
GGGGATCTGG (
6
)
1.7
0.0017
P10.5 crx- retina
AAGCTGAGTG
(
4
)
22.3
0.0223
P10.5 crx- retina
AGCCGGCCAA
(
2
)
14.9
0.0149
P10.5 crx+ retina
AAGCTGAGTG
(
4
)
9.6
0.0096
P10.5 crx+ retina
AGCCGGCCAA
(
2
)
7.7
0.0077
P10.5 crx+ retina
CTCCGAAGGA (
3
)
1.9
0.0019
P10.5 crx+ retina
CTGGCCTCAA
(
8
)
1.9
0.0019
Adult retinal
AAGCTGAGTG
(
4
)
9.3
0.0093
Adult retinal
AGCCGGCCAA
(
2
)
5.6
0.0056
Adult retinal
GGAACTTTGA
(
3
)
1.9
0.0019
ONL
AAGCTGAGTG
(
4
)
13.4
0.0134
ONL
CTGGCCTCAA
(
8
)
1.9
0.0019
ONL
GAGTTCAGGA (
5
)
1.9
0.0019
ONL
GGAACTTTGA
(
3
)
1.9
0.0019
ONL
TCTTTAAAAA (
7
)
1.9
0.0019
