Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275742	A330103N21Rik	RIKEN cDNA A330103N21 gene	7		77773
Mm.275742	D930020L01	hypothetical protein D930020L01	7		330557
Mm.275742	Igf1r	insulin-like growth factor I receptor	7	7 33.0 cM	16001
Gene Ontology	ATP binding | brain development | epidermal growth factor receptor activity | extracellular space | IGF receptor signaling pathway | integral to membrane | male sex determination | membrane | organogenesis | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	IGF1R[insulin-like growth factor 1 receptor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 154 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC GATTAAGTTA (4) 4.9 0.0049 P8 Cb GC ACGTTAGGGA (3) 1.6 0.0016 P8 Cb GC CACACACAGG (7) 1.6 0.0016 P8 Cb GC GCCTTAAAAA (9) 1.6 0.0016 P8 Cb GC GGCTTCTCCT (4) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CACACACAGG (7) 2.3 0.0023 Cb medulloblastoma CCCCAGAGCG (5) 2.3 0.0023 Cb medulloblastoma GGAAGGTGGG (11) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture GGCTTCTCCT (4) 8 0.008 P8 GC+1d culture GATTAAGTTA (4) 6.8 0.0068 P8 GC+1d culture TGTGTGGGTG (4) 5.7 0.0057 P8 GC+1d culture CCCCAGAGCG (5) 4.6 0.0046 P8 GC+1d culture TACAGGTGGA (3) 3.4 0.0034 P8 GC+1d culture CCCTCCTGGC (6) 1.1 0.0011 P8 GC+1d culture CTTTCTGCTC (8) 1.1 0.0011 P8 GC+1d culture TGGTACTTTA (4) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture GATTAAGTTA (4) 4.7 0.0047 P8 GC+SHH+1d culture CCCCAGAGCG (5) 3.5 0.0035 P8 GC+SHH+1d culture CCCTCCTGGC (6) 3.5 0.0035 P8 GC+SHH+1d culture GGCCTCTGCA (4) 2.3 0.0023 P8 GC+SHH+1d culture CACACACAGG (7) 1.2 0.0012 P8 GC+SHH+1d culture CTTTCTGCTC (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCTTCTCCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TACAGGTGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGTACTTTA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTGGGTG (4) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts CCCTCCTGGC (6) 3.5 0.0035 3T3 fibroblasts GGCCTCTGCA (4) 3.5 0.0035 3T3 fibroblasts TACAGGTGGA (3) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GGAAGGTGGG (11) 9.9 0.0099 E15 cortex GGCTTCTCCT (4) 9.9 0.0099 E15 cortex CCCCAGAGCG (5) 4.9 0.0049 E15 cortex CCCTCCTGGC (6) 4.9 0.0049 E15 cortex CTTTCTGCTC (8) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex CTTTCTGCTC (8) 4.5 0.0045 P1 cortex GGCTTCTCCT (4) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus GGAAGGTGGG (11) 7.2 0.0072 Hypothalamus TGTGTGGGTG (4) 7.2 0.0072 Hypothalamus CTTTCTGCTC (8) 1.8 0.0018 Hypothalamus GCCTTAAAAA (9) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CCCCAGAGCG (5) 1.9 0.0019 E12.5 retina GATTAAGTTA (4) 1.9 0.0019 E12.5 retina GGAAGGTGGG (11) 1.9 0.0019 E12.5 retina GGCTTCTCCT (4) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CACACACAGG (7) 1.8 0.0018 E14.5 retina CCCCAGAGCG (5) 1.8 0.0018 E14.5 retina GATTAAGTTA (4) 1.8 0.0018 E14.5 retina GGCTTCTCCT (4) 1.8 0.0018 E14.5 retina TGTGTGGGTG (4) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina GATTAAGTTA (4) 5.4 0.0054 E16.5 retina CTTTCTGCTC (8) 3.6 0.0036 E16.5 retina GGAAGGTGGG (11) 3.6 0.0036 E16.5 retina GGCTTCTCCT (4) 3.6 0.0036 E16.5 retina CACACACAGG (7) 1.8 0.0018 E16.5 retina CCCCAGAGCG (5) 1.8 0.0018 E16.5 retina CCCTCCTGGC (6) 1.8 0.0018 E16.5 retina GGCCTCTGCA (4) 1.8 0.0018 E16.5 retina TGTGTGGGTG (4) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CCCCAGAGCG (5) 3.6 0.0036 E18.5 retina CACACACAGG (7) 1.8 0.0018 E18.5 retina CTTTCTGCTC (8) 1.8 0.0018 E18.5 retina GATTAAGTTA (4) 1.8 0.0018 E18.5 retina GCCTTAAAAA (9) 1.8 0.0018 E18.5 retina TGTGTGGGTG (4) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina GGCTTCTCCT (4) 7.9 0.0079 P0.5 retina CCCCAGAGCG (5) 3.9 0.0039 P0.5 retina GATTAAGTTA (4) 3.9 0.0039 P0.5 retina GGAAGGTGGG (11) 3.9 0.0039 P0.5 retina TGTGTGGGTG (4) 3.9 0.0039 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina GATTAAGTTA (4) 12.3 0.0123 P2.5 retina GGAAGGTGGG (11) 7 0.007 P2.5 retina CTTTCTGCTC (8) 3.5 0.0035 P2.5 retina GGCTTCTCCT (4) 3.5 0.0035 P2.5 retina ACGTTAGGGA (3) 1.8 0.0018 P2.5 retina CCCTCCTGGC (6) 1.8 0.0018 P2.5 retina CTAAGAAAAT (8) 1.8 0.0018 P2.5 retina GCCTTAAAAA (9) 1.8 0.0018 P2.5 retina GGCCTCTGCA (4) 1.8 0.0018 P2.5 retina TGTGTGGGTG (4) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GGAAGGTGGG (11) 15.9 0.0159 P4.5 retina GATTAAGTTA (4) 7.9 0.0079 P4.5 retina CCCTCCTGGC (6) 4 0.004 P4.5 retina CTTTCTGCTC (8) 4 0.004 P4.5 retina CCCCAGAGCG (5) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GATTAAGTTA (4) 5 0.005 P6.5 retina GGAAGGTGGG (11) 5 0.005 P6.5 retina TACAGGTGGA (3) 3.3 0.0033 P6.5 retina CCCTCCTGGC (6) 1.7 0.0017 P6.5 retina CTAAGAAAAT (8) 1.7 0.0017 P6.5 retina CTTTCTGCTC (8) 1.7 0.0017 P6.5 retina GCCTTAAAAA (9) 1.7 0.0017 P6.5 retina GGCTTCTCCT (4) 1.7 0.0017 P6.5 retina TGTGTGGGTG (4) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GATTAAGTTA (4) 7.4 0.0074 P10.5 crx- retina GGCTTCTCCT (4) 5.6 0.0056 P10.5 crx- retina CTAAGAAAAT (8) 3.7 0.0037 P10.5 crx- retina GGAAGGTGGG (11) 3.7 0.0037 P10.5 crx- retina GGCCTCTGCA (4) 3.7 0.0037 P10.5 crx- retina ACGTTAGGGA (3) 1.9 0.0019 P10.5 crx- retina CTTTCTGCTC (8) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina GATTAAGTTA (4) 9.6 0.0096 P10.5 crx+ retina TGTGTGGGTG (4) 7.7 0.0077 P10.5 crx+ retina GGCCTCTGCA (4) 3.8 0.0038 P10.5 crx+ retina GGCTTCTCCT (4) 3.8 0.0038 P10.5 crx+ retina CCCCAGAGCG (5) 1.9 0.0019 P10.5 crx+ retina GGAAGGTGGG (11) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CCCCAGAGCG (5) 7.4 0.0074 Adult retinal TGTGTGGGTG (4) 5.6 0.0056 Adult retinal GGCTTCTCCT (4) 3.7 0.0037 Adult retinal CCCTCCTGGC (6) 1.9 0.0019 Adult retinal GATTAAGTTA (4) 1.9 0.0019 Adult retinal TGGTACTTTA (4) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL CCCCAGAGCG (5) 3.8 0.0038 ONL GATTAAGTTA (4) 3.8 0.0038 ONL GGAAGGTGGG (11) 1.9 0.0019 ONL GGCTTCTCCT (4) 1.9 0.0019