Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275744
2410118P20Rik
RIKEN cDNA 2410118P20 gene
7
73683
Human Homolog
FLJ00012[hypothetical protein FLJ00012]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTGTTAAAA (
4
)
22.8
0.0228
P8 Cb GC
CAGGCAAAAT (
8
)
4.9
0.0049
P8 Cb GC
CCTTCTGCCT (
7
)
4.9
0.0049
P8 Cb GC
TGAGGGCCAG
(
4
)
1.6
0.0016
Cb medulloblastoma
TTTGTTAAAA (
4
)
16.2
0.0162
Cb medulloblastoma
TGAGGGCCAG
(
4
)
4.6
0.0046
Cb medulloblastoma
CCTTCTGCCT (
7
)
2.3
0.0023
P8 GC+1d culture
TTTGTTAAAA (
4
)
24
0.024
P8 GC+1d culture
CCTTCTGCCT (
7
)
4.6
0.0046
P8 GC+SHH+1d culture
TTTGTTAAAA (
4
)
16.4
0.0164
P8 GC+SHH+1d culture
CAGGCAAAAT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTCTGCCT (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAGGGCCAG
(
4
)
1.2
0.0012
3T3 fibroblasts
CCTTCTGCCT (
7
)
3.5
0.0035
E15 cortex
TGAGGGCCAG
(
4
)
4.9
0.0049
E15 cortex
TTTGTTAAAA (
4
)
4.9
0.0049
P1 cortex
CCTTCTGCCT (
7
)
13.6
0.0136
P1 cortex
TTTGTTAAAA (
4
)
9.1
0.0091
Hypothalamus
TTTGTTAAAA (
4
)
7.2
0.0072
Hypothalamus
CCTTCTGCCT (
7
)
1.8
0.0018
Hypothalamus
TGAGGGCCAG
(
4
)
1.8
0.0018
E12.5 retina
TTTGTTAAAA (
4
)
5.6
0.0056
E12.5 retina
CCTTCTGCCT (
7
)
3.8
0.0038
E12.5 retina
CAGGCAAAAT (
8
)
1.9
0.0019
E12.5 retina
TGAGGGCCAG
(
4
)
1.9
0.0019
E14.5 retina
TTTGTTAAAA (
4
)
14.6
0.0146
E14.5 retina
CAGGCAAAAT (
8
)
5.5
0.0055
E14.5 retina
TGAGGGCCAG
(
4
)
5.5
0.0055
E14.5 retina
CCTTCTGCCT (
7
)
3.6
0.0036
E16.5 retina
TGAGGGCCAG
(
4
)
7.2
0.0072
E16.5 retina
TTTGTTAAAA (
4
)
5.4
0.0054
E16.5 retina
CCTTCTGCCT (
7
)
3.6
0.0036
E16.5 retina
CAGGCAAAAT (
8
)
1.8
0.0018
E18.5 retina
TTTGTTAAAA (
4
)
54.6
0.0546
E18.5 retina
CCTTCTGCCT (
7
)
9.1
0.0091
E18.5 retina
CAGGCAAAAT (
8
)
5.5
0.0055
E18.5 retina
TGAGGGCCAG
(
4
)
3.6
0.0036
P0.5 retina
TTTGTTAAAA (
4
)
3.9
0.0039
P0.5 retina
CAGGCAAAAT (
8
)
2
0.002
P0.5 retina
CCTTCTGCCT (
7
)
2
0.002
P0.5 retina
TGAGGGCCAG
(
4
)
2
0.002
P2.5 retina
TTTGTTAAAA (
4
)
24.6
0.0246
P2.5 retina
CAGGCAAAAT (
8
)
3.5
0.0035
P2.5 retina
CCTTCTGCCT (
7
)
1.8
0.0018
P2.5 retina
TGAGGGCCAG
(
4
)
1.8
0.0018
P4.5 retina
TTTGTTAAAA (
4
)
29.7
0.0297
P4.5 retina
CAGGCAAAAT (
8
)
4
0.004
P4.5 retina
TGAGGGCCAG
(
4
)
2
0.002
P6.5 retina
TTTGTTAAAA (
4
)
16.7
0.0167
P6.5 retina
CCTTCTGCCT (
7
)
3.3
0.0033
P6.5 retina
TGAGGGCCAG
(
4
)
3.3
0.0033
P6.5 retina
CAGGCAAAAT (
8
)
1.7
0.0017
P10.5 crx- retina
TTTGTTAAAA (
4
)
9.3
0.0093
P10.5 crx- retina
TGAGGGCCAG
(
4
)
7.4
0.0074
P10.5 crx- retina
CCTTCTGCCT (
7
)
1.9
0.0019
P10.5 crx+ retina
TTTGTTAAAA (
4
)
11.5
0.0115
P10.5 crx+ retina
TGAGGGCCAG
(
4
)
5.8
0.0058
P10.5 crx+ retina
CAGGCAAAAT (
8
)
1.9
0.0019
P10.5 crx+ retina
CCTTCTGCCT (
7
)
1.9
0.0019
Adult retinal
TTTGTTAAAA (
4
)
9.3
0.0093
Adult retinal
TGAGGGCCAG
(
4
)
3.7
0.0037
Adult retinal
CAGGCAAAAT (
8
)
1.9
0.0019
Adult retinal
CCTTCTGCCT (
7
)
1.9
0.0019
ONL
TTTGTTAAAA (
4
)
19.2
0.0192
ONL
CAGGCAAAAT (
8
)
9.6
0.0096
ONL
TGAGGGCCAG
(
4
)
1.9
0.0019
