Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275810	Rps10	ribosomal protein S10	17		67097
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | structural constituent of ribosome
Human Homolog	RPS10[ribosomal protein S10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 182 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CAGTCTCTCA (5) 32.6 0.0326 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC AGTGAGACCA (3) 3.3 0.0033 P8 Cb GC TTTTTCTTTA (9) 3.3 0.0033 P8 Cb GC CCCGCCACCC (2) 1.6 0.0016 P8 Cb GC TAAATAATTT (4) 1.6 0.0016 P8 Cb GC TTAAAAAAAG (5) 1.6 0.0016 P8 Cb GC TTTAAATAAA (8) 1.6 0.0016 P8 Cb GC TTTTTATAAA (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AGTGAGACCA (3) 78.6 0.0786 Cb medulloblastoma CAGTCTCTCA (5) 20.8 0.0208 Cb medulloblastoma CCCGCCACCC (2) 11.6 0.0116 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma GCAAAAAAGA (5) 2.3 0.0023 Cb medulloblastoma TGGACATCCT 2.3 0.0023 Cb medulloblastoma TTTTTTAAAA (15) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CAGTCTCTCA (5) 38.8 0.0388 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture GGAGGGAGGA (7) 3.4 0.0034 P8 GC+1d culture CCCGCCACCC (2) 2.3 0.0023 P8 GC+1d culture TGGACATCCT 2.3 0.0023 P8 GC+1d culture TTTAAATAAA (8) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture CAGCCTCTCA (2) 1.1 0.0011 P8 GC+1d culture GAGACATTTC (5) 1.1 0.0011 P8 GC+1d culture TTTTTCTTTA (9) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CAGTCTCTCA (5) 31.6 0.0316 P8 GC+SHH+1d culture CCCGCCACCC (2) 9.4 0.0094 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture TAAATAATTT (4) 3.5 0.0035 P8 GC+SHH+1d culture TTAAAAAAAG (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTTAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture TGGACATCCT 2.3 0.0023 P8 GC+SHH+1d culture AAGGTCACAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGAGGGAGGA (7) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTATAAA (4) 1.2 0.0012 3T3 fibroblasts CAGTCTCTCA (5) 168.2 0.1682 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AAGGTCACAG (6) 7 0.007 3T3 fibroblasts CCCGCCACCC (2) 7 0.007 3T3 fibroblasts TGGACATCCT 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CCCGCCACCC (2) 34.6 0.0346 E15 cortex CAGTCTCTCA (5) 29.7 0.0297 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CAGTCTCTCA (5) 45.5 0.0455 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex TTTAAATAAA (8) 4.5 0.0045 P1 cortex TTTTTATAAA (4) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus AGTGAGACCA (3) 36.2 0.0362 Hypothalamus CAGTCTCTCA (5) 7.2 0.0072 Hypothalamus TGGACATCCT 5.4 0.0054 Hypothalamus AAGGTCACAG (6) 3.6 0.0036 Hypothalamus GGAGGGAGGA (7) 3.6 0.0036 Hypothalamus TTTTTCTTTA (9) 3.6 0.0036 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus TTAAAAAAAG (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CAGTCTCTCA (5) 46.9 0.0469 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CCCGCCACCC (2) 5.6 0.0056 E12.5 retina AAGGTCACAG (6) 1.9 0.0019 E12.5 retina TGGACATCCT 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AAGGTTGGGC (2) 5.5 0.0055 E14.5 retina CAGTCTCTCA (5) 5.5 0.0055 E14.5 retina TGGACATCCT 5.5 0.0055 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E14.5 retina CCCGCCACCC (2) 1.8 0.0018 E14.5 retina GAGACATTTC (5) 1.8 0.0018 E14.5 retina GGAGGGAGGA (7) 1.8 0.0018 E14.5 retina TAAATAATTT (4) 1.8 0.0018 E14.5 retina TTTTTATAAA (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CAGTCTCTCA (5) 5.4 0.0054 E16.5 retina AAGGTTGGGC (2) 3.6 0.0036 E16.5 retina TTAAAAAAAG (5) 3.6 0.0036 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina AAGGTCACAG (6) 1.8 0.0018 E16.5 retina GCAAAAAAGA (5) 1.8 0.0018 E16.5 retina TGGACATCCT 1.8 0.0018 E16.5 retina TTTTTATAAA (4) 1.8 0.0018 E16.5 retina TTTTTCTTTA (9) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CAGTCTCTCA (5) 16.4 0.0164 E18.5 retina TTTTTTAAAA (15) 5.5 0.0055 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina TGGACATCCT 3.6 0.0036 E18.5 retina CCCGCCACCC (2) 1.8 0.0018 E18.5 retina TTTTTATAAA (4) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CAGTCTCTCA (5) 102.1 0.1021 P0.5 retina CCCGCCACCC (2) 9.8 0.0098 P0.5 retina TGGACATCCT 5.9 0.0059 P0.5 retina TTTTTATAAA (4) 3.9 0.0039 P0.5 retina GCAAAAAAGA (5) 2 0.002 P0.5 retina GGAGGGAGGA (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CAGTCTCTCA (5) 24.6 0.0246 P2.5 retina CCCGCCACCC (2) 12.3 0.0123 P2.5 retina GAGACATTTC (5) 8.8 0.0088 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina TGGACATCCT 3.5 0.0035 P2.5 retina TTAAAAAAAG (5) 3.5 0.0035 P2.5 retina AAGGTCACAG (6) 1.8 0.0018 P2.5 retina AAGGTTGGGC (2) 1.8 0.0018 P2.5 retina GCAAAAAAGA (5) 1.8 0.0018 P2.5 retina GGAGGGAGGA (7) 1.8 0.0018 P2.5 retina TTTAAATAAA (8) 1.8 0.0018 P2.5 retina TTTTTTAAAA (15) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GAGACATTTC (5) 15.9 0.0159 P4.5 retina CAGTCTCTCA (5) 9.9 0.0099 P4.5 retina CCCGCCACCC (2) 7.9 0.0079 P4.5 retina TGGACATCCT 4 0.004 P4.5 retina TTAAAAAAAG (5) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P4.5 retina TTTAAATAAA (8) 2 0.002 P4.5 retina TTTTTCTTTA (9) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GAGACATTTC (5) 26.7 0.0267 P6.5 retina CAGTCTCTCA (5) 15 0.015 P6.5 retina CCCGCCACCC (2) 15 0.015 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina TGGACATCCT 3.3 0.0033 P6.5 retina AGTGAGACCA (3) 1.7 0.0017 P6.5 retina CAGCCTCTCA (2) 1.7 0.0017 P6.5 retina GGAGGGAGGA (7) 1.7 0.0017 P6.5 retina TTTAAATAAA (8) 1.7 0.0017 P10.5 crx- retina CAGTCTCTCA (5) 46.4 0.0464 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CCCGCCACCC (2) 9.3 0.0093 P10.5 crx- retina GAGACATTTC (5) 9.3 0.0093 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina TTAAAAAAAG (5) 1.9 0.0019 P10.5 crx- retina TTTTTCTTTA (9) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CAGTCTCTCA (5) 19.2 0.0192 P10.5 crx+ retina CCCGCCACCC (2) 11.5 0.0115 P10.5 crx+ retina GAGACATTTC (5) 7.7 0.0077 P10.5 crx+ retina TGGACATCCT 3.8 0.0038 P10.5 crx+ retina AAGGTCACAG (6) 1.9 0.0019 P10.5 crx+ retina GCAAAAAAGA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CAGTCTCTCA (5) 18.5 0.0185 Adult retinal CCCGCCACCC (2) 14.8 0.0148 Adult retinal ATGAACACTG (30) 11.1 0.0111 Adult retinal GAGACATTTC (5) 11.1 0.0111 Adult retinal AAGGTCACAG (6) 1.9 0.0019 Adult retinal CAGCCTCTCA (2) 1.9 0.0019 Adult retinal GGAGGGAGGA (7) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CAGTCTCTCA (5) 24.9 0.0249 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL ATGAACACTG (30) 13.4 0.0134 ONL CCCGCCACCC (2) 5.7 0.0057 ONL GAGACATTTC (5) 5.7 0.0057 ONL GCAAAAAAGA (5) 1.9 0.0019 ONL TGGACATCCT 1.9 0.0019 ONL TTAAAAAAAG (5) 1.9 0.0019