Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275943
2610529C04Rik
RIKEN cDNA 2610529C04 gene
X
67075
Mm.275943
2810482I07Rik
RIKEN cDNA 2810482I07 gene
X
67243
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 100 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
GTGGCTCATA (
21
)
22.8
0.0228
P8 Cb GC
GCAAAAAAAA (
50
)
14.7
0.0147
P8 Cb GC
GTGACTCACA (
25
)
14.7
0.0147
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GCAAAAAAAA (
50
)
60.1
0.0601
Cb medulloblastoma
GTGACTCACA (
25
)
25.4
0.0254
Cb medulloblastoma
GTGGCTCATA (
21
)
23.1
0.0231
Cb medulloblastoma
TGTGTTATCC
(
4
)
2.3
0.0023
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GTGGCTCATA (
21
)
26.3
0.0263
P8 GC+1d culture
GTGACTCACA (
25
)
14.8
0.0148
P8 GC+1d culture
GCAAAAAAAA (
50
)
12.6
0.0126
P8 GC+1d culture
GCTATCCATA
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
GCAAAAAAAA (
50
)
29.3
0.0293
P8 GC+SHH+1d culture
GTGGCTCATA (
21
)
24.6
0.0246
P8 GC+SHH+1d culture
GTGACTCACA (
25
)
16.4
0.0164
P8 GC+SHH+1d culture
GCTATCCATA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTTCCTGTG (
3
)
1.2
0.0012
3T3 fibroblasts
GTGACTCACA (
25
)
35
0.035
3T3 fibroblasts
GTGGCTCATA (
21
)
24.5
0.0245
3T3 fibroblasts
GCAAAAAAAA (
50
)
3.5
0.0035
3T3 fibroblasts
GCTATCCATA
(
2
)
3.5
0.0035
3T3 fibroblasts
TGTGTTATCC
(
4
)
3.5
0.0035
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GTGGCTCATA (
21
)
39.6
0.0396
E15 cortex
GTGACTCACA (
25
)
19.8
0.0198
E15 cortex
GCAAAAAAAA (
50
)
9.9
0.0099
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
GTGGCTCATA (
21
)
27.3
0.0273
P1 cortex
GTGACTCACA (
25
)
13.6
0.0136
P1 cortex
GCTATCCATA
(
2
)
9.1
0.0091
P1 cortex
GCAAAAAAAA (
50
)
4.5
0.0045
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GTGGCTCATA (
21
)
30.8
0.0308
Hypothalamus
GTGACTCACA (
25
)
21.7
0.0217
Hypothalamus
GCAAAAAAAA (
50
)
19.9
0.0199
Hypothalamus
GCTATCCATA
(
2
)
1.8
0.0018
Hypothalamus
TCTTCCTGTG (
3
)
1.8
0.0018
E12.5 retina
GTGGCTCATA (
21
)
82.6
0.0826
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GTGACTCACA (
25
)
35.7
0.0357
E12.5 retina
GCAAAAAAAA (
50
)
9.4
0.0094
E12.5 retina
TCTTCCTGTG (
3
)
1.9
0.0019
E14.5 retina
GTGGCTCATA (
21
)
49.2
0.0492
E14.5 retina
GTGACTCACA (
25
)
45.5
0.0455
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GCAAAAAAAA (
50
)
12.8
0.0128
E14.5 retina
TCTTCCTGTG (
3
)
12.8
0.0128
E16.5 retina
GTGGCTCATA (
21
)
34.4
0.0344
E16.5 retina
GTGACTCACA (
25
)
29
0.029
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GCAAAAAAAA (
50
)
10.9
0.0109
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GTGGCTCATA (
21
)
47.3
0.0473
E18.5 retina
GTGACTCACA (
25
)
27.3
0.0273
E18.5 retina
GCAAAAAAAA (
50
)
25.5
0.0255
E18.5 retina
GCTATCCATA
(
2
)
1.8
0.0018
P0.5 retina
GTGGCTCATA (
21
)
41.2
0.0412
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
GTGACTCACA (
25
)
29.4
0.0294
P0.5 retina
GCAAAAAAAA (
50
)
17.7
0.0177
P0.5 retina
GCTATCCATA
(
2
)
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GTGGCTCATA (
21
)
49.3
0.0493
P2.5 retina
GTGACTCACA (
25
)
24.6
0.0246
P2.5 retina
GCAAAAAAAA (
50
)
22.9
0.0229
P2.5 retina
TCTTCCTGTG (
3
)
1.8
0.0018
P4.5 retina
GTGGCTCATA (
21
)
53.5
0.0535
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GTGACTCACA (
25
)
27.7
0.0277
P4.5 retina
GCAAAAAAAA (
50
)
25.8
0.0258
P4.5 retina
TCTTCCTGTG (
3
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GTGGCTCATA (
21
)
33.3
0.0333
P6.5 retina
GTGACTCACA (
25
)
26.7
0.0267
P6.5 retina
GCAAAAAAAA (
50
)
11.7
0.0117
P6.5 retina
GCTATCCATA
(
2
)
1.7
0.0017
P6.5 retina
TCTTCCTGTG (
3
)
1.7
0.0017
P10.5 crx- retina
GTGGCTCATA (
21
)
33.4
0.0334
P10.5 crx- retina
GTGACTCACA (
25
)
26
0.026
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GCAAAAAAAA (
50
)
5.6
0.0056
P10.5 crx- retina
GCTATCCATA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
GTGGCTCATA (
21
)
38.4
0.0384
P10.5 crx+ retina
GTGACTCACA (
25
)
30.8
0.0308
P10.5 crx+ retina
GCAAAAAAAA (
50
)
1.9
0.0019
P10.5 crx+ retina
GCTATCCATA
(
2
)
1.9
0.0019
Adult retinal
GTGACTCACA (
25
)
33.3
0.0333
Adult retinal
GTGGCTCATA (
21
)
24.1
0.0241
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GCAAAAAAAA (
50
)
11.1
0.0111
Adult retinal
GCTATCCATA
(
2
)
3.7
0.0037
ONL
GTGGCTCATA (
21
)
49.8
0.0498
ONL
GTGACTCACA (
25
)
34.5
0.0345
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GCAAAAAAAA (
50
)
1.9
0.0019
ONL
GCTATCCATA
(
2
)
1.9
0.0019
