Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276016
Acsl3
acyl-CoA synthetase long-chain family member 3
1
74205
Mm.276016
Utp14b
UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)
1
1 24.1 cM
195434
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
ATTTATATGT
(
4
)
4.6
0.0046
P8 GC+1d culture
ATTTATATGT
(
4
)
CAAATGTGGT
(
2
)
CTCTTAAATG
(
2
)
3.3
0.0033
P8 GC+SHH+1d culture
CAAATGTGGT
(
2
)
1.2
0.0012
3T3 fibroblasts
GATGCCGAAT
(
2
)
3.5
0.0035
E15 cortex
GATGCCGAAT
(
2
)
9.9
0.0099
P1 cortex
ATTTATATGT
(
4
)
4.5
0.0045
Hypothalamus
CTCTTAAATG
(
2
)
3.6
0.0036
E12.5 retina
ATTTATATGT
(
4
)
CAAATGTGGT
(
2
)
3.8
0.0038
E16.5 retina
GTTGCTGGAG
(
2
)
1.8
0.0018
E18.5 retina
ATTTATATGT
(
4
)
CTCTTAAATG
(
2
)
5.4
0.0054
P0.5 retina
GTTGCTGGAG
(
2
)
2
0.002
P2.5 retina
ATTTATATGT
(
4
)
CAAATGTGGT
(
2
)
3.6
0.0036
P6.5 retina
CAAATGTGGT
(
2
)
CTCTTAAATG
(
2
)
3.4
0.0034
P10.5 crx- retina
ATTTATATGT
(
4
)
CAAATGTGGT
(
2
)
CTCTTAAATG
(
2
)
7.5
0.0075
P10.5 crx+ retina
ATTTATATGT
(
4
)
GTTGCTGGAG
(
2
)
3.8
0.0038
Adult retinal
ATTTATATGT
(
4
)
3.7
0.0037
ONL
CTCTTAAATG
(
2
)
1.9
0.0019
