Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276024	Rock2	Rho-associated coiled-coil forming kinase 2	12		19878
Gene Ontology	ATP binding | diacylglycerol binding | intracellular | intracellular signaling cascade | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | signal transduction | transferase activity
Human Homolog	ROCK2[Rho-associated, coiled-coil containing protein kinase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGAAAATG (6) 21.2 0.0212 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC AATGAAGGAT (2) 1.6 0.0016 P8 Cb GC GTGAAGCCCC (2) 1.6 0.0016 P8 Cb GC TACCTAATAA (3) 1.6 0.0016 P8 Cb GC TTTGTGTAAA (7) 1.6 0.0016 Cb medulloblastoma TATGAAAATG (6) 18.5 0.0185 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma TACCTAATAA (3) 4.6 0.0046 Cb medulloblastoma ATTTAGAGAG 2.3 0.0023 Cb medulloblastoma GAAGAGCTGG (9) 2.3 0.0023 Cb medulloblastoma GACAAGAAGG (2) 2.3 0.0023 Cb medulloblastoma TTTGTGTAAA (7) 2.3 0.0023 P8 GC+1d culture TATGAAAATG (6) 29.7 0.0297 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture TACCTAATAA (3) 2.3 0.0023 P8 GC+1d culture GACAAGAAGG (2) 1.1 0.0011 P8 GC+1d culture TACTGTGTAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TATGAAAATG (6) 18.7 0.0187 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture AATGAAGGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture ATTTAGAGAG 1.2 0.0012 P8 GC+SHH+1d culture GACAAGAAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TACCTAATAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TACTGTGTAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTGTAAA (7) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts AATCGAAAAG (2) 3.5 0.0035 3T3 fibroblasts TATGAAAATG (6) 3.5 0.0035 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex AATCGAAAAG (2) 9.9 0.0099 E15 cortex TATGAAAATG (6) 4.9 0.0049 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex TATGAAAATG (6) 4.5 0.0045 Hypothalamus TATGAAAATG (6) 23.5 0.0235 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TACCTAATAA (3) 1.8 0.0018 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina TATGAAAATG (6) 7.5 0.0075 E12.5 retina TACCTAATAA (3) 5.6 0.0056 E12.5 retina AAAGAGCTGG (4) 1.9 0.0019 E12.5 retina AATGAAGGAT (2) 1.9 0.0019 E12.5 retina TACTGTGTAG (4) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina TATGAAAATG (6) 21.9 0.0219 E14.5 retina TACCTAATAA (3) 5.5 0.0055 E14.5 retina AAAGAGCTGG (4) 3.6 0.0036 E14.5 retina AATGAAGGAT (2) 1.8 0.0018 E14.5 retina ATTTAGAGAG 1.8 0.0018 E14.5 retina GACAAGAAGG (2) 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TATGAAAATG (6) 38 0.038 E16.5 retina TACCTAATAA (3) 5.4 0.0054 E16.5 retina AAAGAGCTGG (4) 3.6 0.0036 E16.5 retina GAAGAGCTGG (9) 3.6 0.0036 E18.5 retina TATGAAAATG (6) 29.1 0.0291 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina TACCTAATAA (3) 7.3 0.0073 E18.5 retina TACTGTGTAG (4) 3.6 0.0036 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina TATGAAAATG (6) 7.9 0.0079 P0.5 retina GACAAGAAGG (2) 5.9 0.0059 P0.5 retina GTGAAGCCCC (2) 2 0.002 P0.5 retina TACTGTGTAG (4) 2 0.002 P2.5 retina TATGAAAATG (6) 21.1 0.0211 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TTTTCATTCA (4) 5.3 0.0053 P2.5 retina GTGAAGCCCC (2) 3.5 0.0035 P2.5 retina TACTGTGTAG (4) 3.5 0.0035 P2.5 retina ATTTAGAGAG 1.8 0.0018 P2.5 retina TACCTAATAA (3) 1.8 0.0018 P2.5 retina TTTGTGTAAA (7) 1.8 0.0018 P4.5 retina TATGAAAATG (6) 11.9 0.0119 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina GTGAAGCCCC (2) 2 0.002 P4.5 retina TACCTAATAA (3) 2 0.002 P4.5 retina TTTTCATTCA (4) 2 0.002 P6.5 retina TATGAAAATG (6) 18.3 0.0183 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina TACTGTGTAG (4) 1.7 0.0017 P10.5 crx- retina TATGAAAATG (6) 40.9 0.0409 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina TACCTAATAA (3) 5.6 0.0056 P10.5 crx- retina ATTTAGAGAG 3.7 0.0037 P10.5 crx- retina AAAGAGCTGG (4) 1.9 0.0019 P10.5 crx+ retina TATGAAAATG (6) 19.2 0.0192 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina AATCGAAAAG (2) 1.9 0.0019 P10.5 crx+ retina TACCTAATAA (3) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal TATGAAAATG (6) 9.3 0.0093 Adult retinal GTGAAGCCCC (2) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL TATGAAAATG (6) 19.2 0.0192 ONL GACAAGAAGG (2) 1.9 0.0019 ONL TACCTAATAA (3) 1.9 0.0019 ONL TACTGTGTAG (4) 1.9 0.0019