Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276092	Vps16	vacuolar protein sorting 16 (yeast)	2		80743
Gene Ontology	cytoplasm | intracellular protein transport | membrane | molecular_function unknown | protein transport | transport
Human Homolog	VPS16[vacuolar protein sorting 16 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGTTTAT (5) 11.4 0.0114 P8 Cb GC AGGCCAAGAA (5) 4.9 0.0049 Cb medulloblastoma TTTTGTTTAT (5) 4.6 0.0046 Cb medulloblastoma AGGCCAAGAA (5) 2.3 0.0023 P8 GC+1d culture TTTTGTTTAT (5) 6.8 0.0068 P8 GC+1d culture AGGCCAAGAA (5) 1.1 0.0011 P8 GC+1d culture CTACTGCTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGTTTAT (5) 7 0.007 P8 GC+SHH+1d culture AGGCCAAGAA (5) 3.5 0.0035 P8 GC+SHH+1d culture CTACTGCTCT (5) 1.2 0.0012 3T3 fibroblasts AGGCCAAGAA (5) 10.5 0.0105 E15 cortex TTTTGTTTAT (5) 4.9 0.0049 P1 cortex TTTTGTTTAT (5) 22.7 0.0227 P1 cortex AGGCCAAGAA (5) 13.6 0.0136 Hypothalamus TTTTGTTTAT (5) 7.2 0.0072 Hypothalamus AGGCCAAGAA (5) 1.8 0.0018 E12.5 retina TTTTGTTTAT (5) 11.3 0.0113 E12.5 retina AGGCCAAGAA (5) 1.9 0.0019 E12.5 retina TGTGAAGTCC (4) 1.9 0.0019 E14.5 retina TTTTGTTTAT (5) 5.5 0.0055 E14.5 retina AGGCCAAGAA (5) 1.8 0.0018 E16.5 retina TTTTGTTTAT (5) 10.9 0.0109 E16.5 retina TGTGAAGTCC (4) 1.8 0.0018 P0.5 retina AGGCCAAGAA (5) 15.7 0.0157 P0.5 retina TTTTGTTTAT (5) 9.8 0.0098 P0.5 retina CTACTGCTCT (5) 5.9 0.0059 P2.5 retina AGGCCAAGAA (5) 3.5 0.0035 P2.5 retina TTTTGTTTAT (5) 1.8 0.0018 P4.5 retina TTTTGTTTAT (5) 2 0.002 P6.5 retina TTTTGTTTAT (5) 6.7 0.0067 P6.5 retina AGGCCAAGAA (5) 1.7 0.0017 P10.5 crx- retina TTTTGTTTAT (5) 11.1 0.0111 P10.5 crx- retina AGGCCAAGAA (5) 7.4 0.0074 P10.5 crx- retina CTACTGCTCT (5) 1.9 0.0019 P10.5 crx+ retina AGGCCAAGAA (5) 1.9 0.0019 P10.5 crx+ retina CTACTGCTCT (5) 1.9 0.0019 P10.5 crx+ retina TGTGAAGTCC (4) 1.9 0.0019 P10.5 crx+ retina TTTTGTTTAT (5) 1.9 0.0019 Adult retinal CTACTGCTCT (5) 5.6 0.0056 Adult retinal TTTTGTTTAT (5) 3.7 0.0037 Adult retinal AGGCCAAGAA (5) 1.9 0.0019 ONL TTTTGTTTAT (5) 3.8 0.0038