Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276155
Ihpk1
inositol hexaphosphate kinase 1
9
27399
Mm.276155
4921523L03Rik
RIKEN cDNA 4921523L03 gene
70913
Mm.276155
1700021K14Rik
RIKEN cDNA 1700021K14 gene
9
69398
Mm.276155
AU017982
expressed sequence AU017982
9
102659
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAATTTC
(
9
)
3.3
0.0033
P8 Cb GC
AATCTTATTT (
7
)
1.6
0.0016
P8 Cb GC
ATGAAGATGC (
6
)
1.6
0.0016
P8 Cb GC
GGGCTCCCTG
(
8
)
1.6
0.0016
P8 Cb GC
TCTTTGTTGG
(
6
)
1.6
0.0016
Cb medulloblastoma
GGAAAAGAAA (
11
)
2.3
0.0023
P8 GC+1d culture
GGTTGGGAGC
(
7
)
8
0.008
P8 GC+1d culture
GGAAAAGAAA (
11
)
2.3
0.0023
P8 GC+1d culture
GGGAAATTTC
(
9
)
2.3
0.0023
P8 GC+1d culture
GGGCTCCCTG
(
8
)
2.3
0.0023
P8 GC+1d culture
GGTTGGGGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
AATCTTATTT (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GGTTGGGAGC
(
7
)
5.9
0.0059
P8 GC+SHH+1d culture
CTTCCCCCAG
(
11
)
3.5
0.0035
P8 GC+SHH+1d culture
GGGAAATTTC
(
9
)
2.3
0.0023
P8 GC+SHH+1d culture
GGTTGGGGAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AATCTTATTT (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGCTCCCTG
(
8
)
1.2
0.0012
3T3 fibroblasts
GGTTGGGAGC
(
7
)
7
0.007
3T3 fibroblasts
CAGGCAAGCA (
7
)
3.5
0.0035
E15 cortex
GGTTGGGAGC
(
7
)
29.7
0.0297
E15 cortex
AATCTTATTT (
7
)
4.9
0.0049
E15 cortex
CAGGCAAGCA (
7
)
4.9
0.0049
P1 cortex
GGTTGGGAGC
(
7
)
4.5
0.0045
P1 cortex
TCTTTGTTGG
(
6
)
4.5
0.0045
Hypothalamus
GGTTGGGAGC
(
7
)
3.6
0.0036
Hypothalamus
ACTGGAAAAC (
5
)
1.8
0.0018
Hypothalamus
GGGCTCCCTG
(
8
)
1.8
0.0018
E12.5 retina
ACTGGAAAAC (
5
)
1.9
0.0019
E12.5 retina
ATGAAGATGC (
6
)
1.9
0.0019
E12.5 retina
CAGGCAAGCA (
7
)
1.9
0.0019
E12.5 retina
GGAAAAGAAA (
11
)
1.9
0.0019
E12.5 retina
GGGCTCCCTG
(
8
)
1.9
0.0019
E14.5 retina
CTTCCCCCAG
(
11
)
1.8
0.0018
E14.5 retina
TCTTTGTTGG
(
6
)
1.8
0.0018
E16.5 retina
GGTTGGGAGC
(
7
)
3.6
0.0036
E16.5 retina
AATCTTATTT (
7
)
1.8
0.0018
E16.5 retina
CTTCCCCCAG
(
11
)
1.8
0.0018
E18.5 retina
AATCTTATTT (
7
)
1.8
0.0018
P0.5 retina
GGTTGGGAGC
(
7
)
7.9
0.0079
P0.5 retina
GGAAAAGAAA (
11
)
3.9
0.0039
P0.5 retina
GGTTGGGGAG
(
4
)
2
0.002
P2.5 retina
GGAAAAGAAA (
11
)
1.8
0.0018
P2.5 retina
GGGCTCCCTG
(
8
)
1.8
0.0018
P2.5 retina
GGTTGGGAGC
(
7
)
1.8
0.0018
P4.5 retina
CAGGCAAGCA (
7
)
4
0.004
P4.5 retina
GGTTGGGAGC
(
7
)
2
0.002
P6.5 retina
CAGGCAAGCA (
7
)
1.7
0.0017
P6.5 retina
CTTCCCCCAG
(
11
)
1.7
0.0017
P10.5 crx- retina
CAGGCAAGCA (
7
)
1.9
0.0019
P10.5 crx+ retina
GGTTGGGAGC
(
7
)
3.8
0.0038
Adult retinal
GGTTGGGAGC
(
7
)
16.7
0.0167
Adult retinal
ATGAAGATGC (
6
)
3.7
0.0037
Adult retinal
CAGGCAAGCA (
7
)
3.7
0.0037
Adult retinal
ACTGGAAAAC (
5
)
1.9
0.0019
Adult retinal
CTTCCCCCAG
(
11
)
1.9
0.0019
Adult retinal
GGGAAATTTC
(
9
)
1.9
0.0019
ONL
GGTTGGGAGC
(
7
)
3.8
0.0038
ONL
GGTTGGGGAG
(
4
)
1.9
0.0019
