Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276325	Sod1	superoxide dismutase 1, soluble	16	16 61.0 cM	20655
Gene Ontology	activation of MAPK | antioxidant activity | copper, zinc superoxide dismutase activity | copper, zinc superoxide dismutase activity | copper, zinc superoxide dismutase activity | cytoplasm | DNA fragmentation | metal ion binding | mitochondrion | oxidoreductase activity | removal of superoxide radicals | response to oxidative stress | superoxide metabolism
Human Homolog	SOD1[superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAACAAGA CTTCCCCGGG (2) GGTTCCACGT TTGGAGACCT 16.3 0.0163 Cb medulloblastoma AGAAACAAGA CTTCCCCGGG (2) GACCACCATT 41.6 0.0416 P8 GC+1d culture AGAAACAAGA ATATTTTCTG (3) CTGGCCTTCA 13.7 0.0137 P8 GC+SHH+1d culture AGAAACAAGA CTTCCCCGGG (2) GACCACCATT TTGGAGACCT 30.4 0.0304 3T3 fibroblasts AGAAACAAGA CTGGCCTTCA CTTCCCCGGG (2) 73.6 0.0736 E15 cortex AGAAACAAGA CTTCCCCGGG (2) 34.6 0.0346 P1 cortex AGAAACAAGA CTTCCCCGGG (2) 36.3 0.0363 Hypothalamus AGAAACAAGA CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT TTGGAGACCT 37.9 0.0379 E12.5 retina AGAAACAAGA CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT GGTTCCACGT 54.6 0.0546 E14.5 retina AGAAACAAGA ATATTTTCTG (3) CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT 21.7 0.0217 E16.5 retina AGAAACAAGA ATATTTTCTG (3) CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT GCGATGAAAG TTGGAGACCT 32.6 0.0326 E18.5 retina AGAAACAAGA CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT 27.2 0.0272 P0.5 retina AGAAACAAGA ATATTTTCTG (3) CTTCCCCGGG (2) 39.3 0.0393 P2.5 retina AGAAACAAGA CTTCCCCGGG (2) 37 0.037 P4.5 retina AGAAACAAGA ATATTTTCTG (3) CTGGCCTTCA CTTCCCCGGG (2) 19.8 0.0198 P6.5 retina AGAAACAAGA ATATTTTCTG (3) CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT 40 0.04 P10.5 crx- retina AGAAACAAGA ATATTTTCTG (3) CTTCCCCGGG (2) GCGATGAAAG 29.8 0.0298 P10.5 crx+ retina AGAAACAAGA CTGGCCTTCA CTTCCCCGGG (2) GACCACCATT GGTTCCACGT 38.5 0.0385 Adult retinal AGAAACAAGA CTTCCCCGGG (2) 13 0.013 ONL AGAAACAAGA ATATTTTCTG (3) 9.5 0.0095