Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276337	Rpl17	ribosomal protein L17	7	18 E3	319195
Gene Ontology	intracellular | large ribosomal subunit | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL17[ribosomal protein L17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 278 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) CACAAACGGT (2) CTTTAAAATG (2) GCCCGGGAAA GCCCGGGAAC GCCCGGGAAT GCCCGGGACT (2) GCCCGGGCAA GCTTAAAAAT GGGGGGGGCA TAAAAAAAAA (3) TGCAGCAAAA 794.4 0.7944 Cb medulloblastoma AAAAAAAAAA (2) CACAAACGGT (2) CGTCGCGCAC GCCCGGGAAC GCCCGGGAAT GCCCGGGACT (2) GCCCGGGCAA GCCCGGGGAT GCCCGGGTAT GCTTAAAAAT GGCCGGGAAT TAAAAAAAAA (3) 1274 1.274 P8 GC+1d culture AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) ATTTTGTGGG CACAAACGGT (2) GCCCGGGAAC GCCCGGGAAT GCCCGGGGAT GCTTAAAAAT GGCCGGGAAT GGGGGGGGCA GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA TTATTAAACA (2) 663 0.663 P8 GC+SHH+1d culture AAAAAAAAAA (2) AGCTCCCCCT ATTTTGTGGG CACAAACGGT (2) CGTCGCGCAC CTGCTGCTGG (2) GCCCGGGAAC GCCCGGGAAT GCCCGGGGAT GCTTAAAAAT GGCCGGGAAT GGGGGGGGCA GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 883.3 0.8833 3T3 fibroblasts AAAAAAAAAA (2) AGCTCCCCCT ATTTTGTGGG CACAAACGGT (2) GCCCGGGAAT GGCCCGGGAA GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 315.3 0.3153 E15 cortex AAAAAAAAAA (2) AGCTCCCCCT CACAAACGGT (2) CTGCTGCTGG (2) GCCCCGGGAA GCCCGGGAAC GCCCGGGAAT GCCGGATTAA GGCCGGGAAT TAAAAAAAAA (3) 578.7 0.5787 P1 cortex AAAAAAAAAA (2) CACAAACGGT (2) CTTTAAAATG (2) GCCCGGGAAT GCCGGGAATA TAAAAAAAAA (3) 459 0.459 Hypothalamus AAAAAAAAAA (2) AGCTCTGTAG (3) ATTTTGTGGG CACAAACGGT (2) CGTCGCGCAC GCCCCGGGAA GCCCGGGAAT GCCCGGGACT (2) GCCCGGGGAA GCTTAAAAAT GGCCCGGGAA GGCCGGGAAT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 566.7 0.5667 E12.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) ATTTTGTGGG CAAATCAAGA CACAAACGGT (2) CATAAAATAA CTTAAAAATG GCCCGGGAAT GCCCGGGCAA GCCCGGGGAA GCCGGGAATA GCTTAAAAAT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 985.9 0.9859 E14.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) ATTTTGTGGG CAAATCAAGA CACAAACGGT (2) CATAAAATAA CTGCTGCTGG (2) GCCCCGGGAA GCCCGGGAAT GCCCGGGACT (2) GCCCGGGCAA GCCCGGGGAA GCCGGATTAA GCTTAAAAAT GGCCCGGGAA GGCCGGGAAT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA TTATTAAACA (2) 677.5 0.6775 E16.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) ATGAGCTTTT ATTTTGTGGG CACAAACGGT (2) GCCCGGGAAC GCCCGGGAAT GCCCGGGACT (2) GCCCGGGGAA GCCGGATTAA GCTTAAAAAT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 601.3 0.6013 E18.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) ATGAGCTTTT CAAATCAAGA CACAAACGGT (2) GCCCCGGGAA GCCCGGGAAA GCCCGGGAAT GCCCGGGACT (2) GCCCGGGGAA GCCGGGAATA GCTTAAAAAT GGCACTTTTT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA TTATTAAACA (2) 1260.4 1.2604 P0.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCCCCTG ATTTTGTGGG CACAAACGGT (2) GCACAGGAAT (2) GCCCCGGGAA GCCCGGGAAA GCCCGGGAAT GCCCGGGGAA GCCCGGGGAT GCCCGGGTAT GCCGGGAATA GCTTAAAAAT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA TTATTAAACA (2) 746.1 0.7461 P2.5 retina AAAAAAAAAA (2) AGCTCCCCCT AGCTCTGTAG (3) CACAAACGGT (2) CATAAAATAA CGTCGCGCAC CTTTAAAATG (2) GCCCCGGGAA GCCCGGGAAA GCCCGGGAAC GCCCGGGAAT GCCCGGGGAA GCCCGGGGAT GCCGGGAATA GCTTAAAAAT GGCACTTTTT GGCCCGGGAA GGCCGGGAAT GGGGTACCCC TAAAAAAAAA (3) 899.6 0.8996 P4.5 retina AAAAAAAAAA (2) AGCTCCCCTG AGCTCTGTAG (3) CAAATCAAGA CACAAACGGT (2) GCCCCGGGAA GCCCGGGAAA GCCCGGGAAC GCCCGGGAAT GCTTAAAAAT GGCCGGGAAT TAAAAAAAAA (3) TTATTAAACA (2) 875.8 0.8758 P6.5 retina AAAAAAAAAA (2) AGCTCTGTAG (3) CACAAACGGT (2) CTTAAAAATG GCACAGGAAT (2) GCCCCGGGAA GCCCGGGAAT GCCCGGGGAA GCCCGGGTAT GCCGGATTAA GCTTAAAAAT GGCACTTTTT GGCCCGGGAA TAAAAAAAAA (3) 688.8 0.6888 P10.5 crx- retina AAAAAAAAAA (2) ATTTTGTGGG CAAATCAAGA CACAAACGGT (2) CGTCGCGCAC GCCCCGGGAA GCCCGGGAAT GCCCGGGGAA GCCGGATTAA GCTTAAAAAT GGCACTTTTT GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA 353.3 0.3533 P10.5 crx+ retina AAAAAAAAAA (2) AGCTCTGTAG (3) ATGAGCTTTT ATTTTGTGGG CACAAACGGT (2) GCCCCGGGAA GCCCGGGAAT GGGGGGGGCA TAAAAAAAAA (3) TTATTAAACA (2) 463.2 0.4632 Adult retinal AAAAAAAAAA (2) AGCTCCCCCT AGCTCCCCTG CACAAACGGT (2) CTGCTGCTGG (2) GCCCCGGGAA GCCCGGGAAT GCCCGGGCAA GCTTAAAAAT TAAAAAAAAA (3) 213.2 0.2132 ONL AAAAAAAAAA (2) AGCTCCCCCT CACAAACGGT (2) CATAAAATAA GCCCGGGAAA GCCCGGGAAT GCCCGGGCAA GCTTAAAAAT GGGGGGGGCA GGGGTACCCC TAAAAAAAAA (3) TGCAGCAAAA TTATTAAACA (2) 277.5 0.2775