Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277190	D5Ertd149e	DNA segment, Chr 5, ERATO Doi 149, expressed	5	5 11.0 cM	52180
Mm.277190	Paxip1	PAX interacting (with transcription-activation domain) protein 1	5		55982
Gene Ontology	intracellular | nucleus
Human Homolog	PAXIP1L[PAX transcription activation domain interacting protein 1 like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTTAAGATG (6) 16.3 0.0163 P8 Cb GC AACCAGGACT (6) 3.3 0.0033 Cb medulloblastoma TGTTAAGATG (6) 2.3 0.0023 P8 GC+1d culture TGTTAAGATG (6) 11.4 0.0114 P8 GC+1d culture AACCAGGACT (6) 1.1 0.0011 P8 GC+1d culture GGTGAGATCC (7) 1.1 0.0011 P8 GC+SHH+1d culture TGTTAAGATG (6) 14.1 0.0141 P8 GC+SHH+1d culture GGTGAGATCC (7) 2.3 0.0023 P8 GC+SHH+1d culture GTGTAGGACA (5) 2.3 0.0023 P8 GC+SHH+1d culture AACCAGGACT (6) 1.2 0.0012 3T3 fibroblasts CCCTGCAGCA (3) 14 0.014 3T3 fibroblasts GGTGAGATCC (7) 3.5 0.0035 E15 cortex GGTGAGATCC (7) 14.8 0.0148 E15 cortex TGTTAAGATG (6) 4.9 0.0049 Hypothalamus GGTGAGATCC (7) 1.8 0.0018 Hypothalamus TGTTAAGATG (6) 1.8 0.0018 E12.5 retina TGTTAAGATG (6) 11.3 0.0113 E12.5 retina AACCAGGACT (6) 1.9 0.0019 E12.5 retina GGTGAGATCC (7) 1.9 0.0019 E12.5 retina GTGTAGGACA (5) 1.9 0.0019 E14.5 retina TGTTAAGATG (6) 25.5 0.0255 E16.5 retina TGTTAAGATG (6) 29 0.029 E16.5 retina AACCAGGACT (6) 1.8 0.0018 E16.5 retina GTGTAGGACA (5) 1.8 0.0018 E18.5 retina TGTTAAGATG (6) 27.3 0.0273 E18.5 retina AACCAGGACT (6) 1.8 0.0018 E18.5 retina GGTGAGATCC (7) 1.8 0.0018 P0.5 retina TGTTAAGATG (6) 19.6 0.0196 P0.5 retina AACCAGGACT (6) 3.9 0.0039 P2.5 retina TGTTAAGATG (6) 14.1 0.0141 P2.5 retina AACCAGGACT (6) 1.8 0.0018 P2.5 retina GGTGAGATCC (7) 1.8 0.0018 P4.5 retina TGTTAAGATG (6) 5.9 0.0059 P4.5 retina AACCAGGACT (6) 2 0.002 P4.5 retina CCCTGCAGCA (3) 2 0.002 P4.5 retina GTGTAGGACA (5) 2 0.002 P6.5 retina TGTTAAGATG (6) 6.7 0.0067 P6.5 retina AACCAGGACT (6) 1.7 0.0017 P6.5 retina CCACTGTCAG (4) 1.7 0.0017 P6.5 retina GGTGAGATCC (7) 1.7 0.0017 P10.5 crx- retina TGTTAAGATG (6) 18.6 0.0186 P10.5 crx- retina AACCAGGACT (6) 1.9 0.0019 P10.5 crx- retina GGTGAGATCC (7) 1.9 0.0019 P10.5 crx+ retina CCACTGTCAG (4) 1.9 0.0019 P10.5 crx+ retina TGTTAAGATG (6) 1.9 0.0019 Adult retinal AACCAGGACT (6) 3.7 0.0037 Adult retinal CCACTGTCAG (4) 1.9 0.0019 Adult retinal GGTGAGATCC (7) 1.9 0.0019 Adult retinal TGTTAAGATG (6) 1.9 0.0019 ONL CCACTGTCAG (4) 1.9 0.0019