Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277384
BC023754
cDNA sequence BC023754
19
329015
Mm.277384
1810013C15Rik
RIKEN cDNA 1810013C15 gene
19
69041
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGTGGAATA
(
2
)
GCTAAGGCTT
3.2
0.0032
Cb medulloblastoma
AAGTGGAATA
(
2
)
2.3
0.0023
P8 GC+1d culture
AGAGCTTTAA
GCTAAGGCTT
GGCTCCTGGG (
2
)
TGGGAGCCTG
(
2
)
9.1
0.0091
P8 GC+SHH+1d culture
AAGTGGAATA
(
2
)
AGAGCTTTAA
GCTAAGGCTT
15.2
0.0152
3T3 fibroblasts
GCTAAGGCTT
10.5
0.0105
E15 cortex
GCTAAGGCTT
4.9
0.0049
P1 cortex
AGAGCTTTAA
4.5
0.0045
E12.5 retina
AAGTGGAATA
(
2
)
GCTAAGGCTT
5.7
0.0057
E14.5 retina
AAGTGGAATA
(
2
)
GCTAAGGCTT
5.4
0.0054
E16.5 retina
GCTAAGGCTT
1.8
0.0018
E18.5 retina
AAGTGGAATA
(
2
)
AGAGCTTTAA
GCTAAGGCTT
14.5
0.0145
P0.5 retina
AAGTGGAATA
(
2
)
5.9
0.0059
P2.5 retina
AAGTGGAATA
(
2
)
AGAGCTTTAA
GCTAAGGCTT
TGGGAGCCTG
(
2
)
14.1
0.0141
P4.5 retina
AAGTGGAATA
(
2
)
GCTAAGGCTT
15.8
0.0158
P6.5 retina
AAGTGGAATA
(
2
)
AGAGCTTTAA
GACACGTCCA
(
2
)
GCTAAGGCTT
15
0.015
P10.5 crx- retina
AAGTGGAATA
(
2
)
GCTAAGGCTT
7.5
0.0075
P10.5 crx+ retina
AAGTGGAATA
(
2
)
AAGTGGGATA
(
2
)
GACACGTCCA
(
2
)
TGGGAGCCTG
(
2
)
11.5
0.0115
Adult retinal
GACACGTCCA
(
2
)
1.9
0.0019
ONL
AAGTGGGATA
(
2
)
GACACGTCCA
(
2
)
TGGGAGCCTG
(
2
)
9.5
0.0095
