Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277413
AI449212
expressed sequence AI449212
5
100653
Mm.277413
C77604
expressed sequence C77604
5
231889
Human Homolog
G10[maternal G10 transcript]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCTGTACAG
(
3
)
11.4
0.0114
Cb medulloblastoma
AGCTGTACAG
(
3
)
9.2
0.0092
Cb medulloblastoma
CTTCCCCCCC (
3
)
4.6
0.0046
P8 GC+1d culture
AGCTGTACAG
(
3
)
14.8
0.0148
P8 GC+1d culture
CTTCCCCCCC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AGCTGTACAG
(
3
)
23.4
0.0234
P8 GC+SHH+1d culture
ATTGCAAAGT (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTCCCCCCC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGAAAGAG
(
8
)
1.2
0.0012
3T3 fibroblasts
AGCTGTACAG
(
3
)
49.1
0.0491
3T3 fibroblasts
CTTCCCCCCC (
3
)
3.5
0.0035
E15 cortex
CTTCCCCCCC (
3
)
9.9
0.0099
E15 cortex
AGCTGTACAG
(
3
)
4.9
0.0049
P1 cortex
AGCTGTACAG
(
3
)
4.5
0.0045
P1 cortex
CTTCCCCCCC (
3
)
4.5
0.0045
Hypothalamus
AGCTGTACAG
(
3
)
14.5
0.0145
Hypothalamus
CTTCCCCCCC (
3
)
3.6
0.0036
E12.5 retina
AGCTGTACAG
(
3
)
22.5
0.0225
E14.5 retina
AGCTGTACAG
(
3
)
23.7
0.0237
E16.5 retina
AGCTGTACAG
(
3
)
16.3
0.0163
E16.5 retina
CTTCCCCCCC (
3
)
5.4
0.0054
E16.5 retina
AGGGAAAGAG
(
5
)
3.6
0.0036
E18.5 retina
AGCTGTACAG
(
3
)
14.6
0.0146
E18.5 retina
CTTCCCCCCC (
3
)
1.8
0.0018
P0.5 retina
AGCTGTACAG
(
3
)
13.7
0.0137
P0.5 retina
ATTGCAAAGT (
3
)
2
0.002
P2.5 retina
AGCTGTACAG
(
3
)
33.4
0.0334
P2.5 retina
GGGGAAAGAG
(
8
)
3.5
0.0035
P4.5 retina
AGCTGTACAG
(
3
)
13.9
0.0139
P4.5 retina
ATTGCAAAGT (
3
)
2
0.002
P6.5 retina
AGCTGTACAG
(
3
)
13.3
0.0133
P6.5 retina
ATTGCAAAGT (
3
)
3.3
0.0033
P6.5 retina
GGGGAAAGAG
(
8
)
1.7
0.0017
P10.5 crx- retina
AGCTGTACAG
(
3
)
18.6
0.0186
P10.5 crx- retina
ATTGCAAAGT (
3
)
1.9
0.0019
P10.5 crx+ retina
AGCTGTACAG
(
3
)
19.2
0.0192
P10.5 crx+ retina
ATTGCAAAGT (
3
)
3.8
0.0038
Adult retinal
AGCTGTACAG
(
3
)
13
0.013
Adult retinal
CTTCCCCCCC (
3
)
5.6
0.0056
Adult retinal
ATTGCAAAGT (
3
)
1.9
0.0019
ONL
AGCTGTACAG
(
3
)
13.4
0.0134
ONL
AGGGAAAGAG
(
5
)
1.9
0.0019
