Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277665
Calb1
calbindin-28K
4
4 10.5 cM
12307
Gene Ontology
calcium ion binding
|
cytoplasm
|
locomotory behavior
Human Homolog
CALB1[calbindin 1, 28kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCAAGCCCC (
6
)
215.3
0.2153
P8 Cb GC
TGTTCCAGAT
(
3
)
1.6
0.0016
Cb medulloblastoma
TGTTCCAGAT
(
3
)
71.7
0.0717
Cb medulloblastoma
GGCAAGCCCC (
6
)
69.4
0.0694
Cb medulloblastoma
ATGGTGTCAG
(
5
)
9.2
0.0092
Cb medulloblastoma
TAACTCTGTT
4.6
0.0046
Cb medulloblastoma
TTTCAAAAAC
(
2
)
2.3
0.0023
P8 GC+1d culture
GGCAAGCCCC (
6
)
137
0.137
P8 GC+SHH+1d culture
GGCAAGCCCC (
6
)
196.7
0.1967
3T3 fibroblasts
GGCAAGCCCC (
6
)
389.1
0.3891
E15 cortex
GGCAAGCCCC (
6
)
183.1
0.1831
P1 cortex
GGCAAGCCCC (
6
)
86.4
0.0864
Hypothalamus
GGCAAGCCCC (
6
)
103.2
0.1032
Hypothalamus
TGTTCCAGAT
(
3
)
19.9
0.0199
Hypothalamus
ATGGTGTCAG
(
5
)
1.8
0.0018
E12.5 retina
GGCAAGCCCC (
6
)
405.5
0.4055
E14.5 retina
GGCAAGCCCC (
6
)
428.2
0.4282
E14.5 retina
TGTTCCAGAT
(
3
)
3.6
0.0036
E16.5 retina
GGCAAGCCCC (
6
)
594.1
0.5941
E16.5 retina
TGTTCCAGAT
(
3
)
1.8
0.0018
E18.5 retina
GGCAAGCCCC (
6
)
372.9
0.3729
E18.5 retina
TGTTCCAGAT
(
3
)
5.5
0.0055
P0.5 retina
GGCAAGCCCC (
6
)
237.5
0.2375
P2.5 retina
GGCAAGCCCC (
6
)
256.9
0.2569
P4.5 retina
GGCAAGCCCC (
6
)
328.9
0.3289
P6.5 retina
GGCAAGCCCC (
6
)
275.1
0.2751
P6.5 retina
TGTTCCAGAT
(
3
)
1.7
0.0017
P10.5 crx- retina
GGCAAGCCCC (
6
)
436.6
0.4366
P10.5 crx- retina
TGTTCCAGAT
(
3
)
5.6
0.0056
P10.5 crx+ retina
GGCAAGCCCC (
6
)
344.1
0.3441
P10.5 crx+ retina
TGTTCCAGAT
(
3
)
3.8
0.0038
Adult retinal
GGCAAGCCCC (
6
)
122.2
0.1222
Adult retinal
TGTTCCAGAT
(
3
)
9.3
0.0093
ONL
GGCAAGCCCC (
6
)
122.6
0.1226
ONL
TGTTCCAGAT
(
3
)
5.7
0.0057
ONL
TTTCAAAAAC
(
2
)
3.8
0.0038
ONL
TAACTCTGTT
1.9
0.0019
