Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277857	Cd63	Cd63 antigen	10	10 D3 (10 72.0 cM)	12512
Gene Ontology	integral to membrane | lysosome | plasma membrane
Human Homolog	CD63[CD63 antigen (melanoma 1 antigen)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGGATTC (4) 106 0.106 P8 Cb GC AGAGAGAGAG (8) 6.5 0.0065 P8 Cb GC GAGGTGGAAT (4) 4.9 0.0049 P8 Cb GC ATGTCTAAAA (2) 1.6 0.0016 P8 Cb GC CCTGGCCTTT (5) 1.6 0.0016 P8 Cb GC GAGTGGATTT 1.6 0.0016 P8 Cb GC GCGGGGATGT (2) 1.6 0.0016 Cb medulloblastoma GAGTGGATTC (4) 27.7 0.0277 Cb medulloblastoma AGAGAGAGAG (8) 25.4 0.0254 Cb medulloblastoma GAGGTGGAAT (4) 9.2 0.0092 Cb medulloblastoma GCGGGGATGT (2) 2.3 0.0023 P8 GC+1d culture GAGTGGATTC (4) 147.3 0.1473 P8 GC+1d culture GAGGTGGAAT (4) 4.6 0.0046 P8 GC+1d culture AGAGAGAGAG (8) 3.4 0.0034 P8 GC+1d culture GAGTGGATTA 2.3 0.0023 P8 GC+1d culture GAGTGGGTTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGTGGATTC (4) 169.8 0.1698 P8 GC+SHH+1d culture GAGGTGGAAT (4) 5.9 0.0059 P8 GC+SHH+1d culture AAAAGACCAA (2) 3.5 0.0035 P8 GC+SHH+1d culture AGAGAGAGAG (8) 2.3 0.0023 P8 GC+SHH+1d culture GAGTGGATTA 1.2 0.0012 P8 GC+SHH+1d culture GAGTGGATTT 1.2 0.0012 P8 GC+SHH+1d culture GAGTGGGTTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAAAGGACA (4) 1.2 0.0012 P8 GC+SHH+1d culture GCAAGACAGA (13) 1.2 0.0012 3T3 fibroblasts GAGTGGATTC (4) 35 0.035 3T3 fibroblasts GCGGGGATGT (2) 17.5 0.0175 3T3 fibroblasts GCAAAGGACA (4) 14 0.014 3T3 fibroblasts GAGGTGGAAT (4) 3.5 0.0035 E15 cortex AGAGAGAGAG (8) 9.9 0.0099 E15 cortex GCGGGGATGT (2) 9.9 0.0099 E15 cortex CCTGGCCTTT (5) 4.9 0.0049 E15 cortex GAGTGGATTA 4.9 0.0049 P1 cortex AGAGAGAGAG (8) 4.5 0.0045 Hypothalamus GAGTGGATTC (4) 29 0.029 Hypothalamus AGAGAGAGAG (8) 14.5 0.0145 Hypothalamus GAGGTGGAAT (4) 9.1 0.0091 Hypothalamus AAAAGACCAA (2) 1.8 0.0018 Hypothalamus GAGTGGATTT 1.8 0.0018 Hypothalamus GCCGGGGAAT (2) 1.8 0.0018 E12.5 retina GAGTGGATTC (4) 16.9 0.0169 E12.5 retina AAAAAACCAA (2) 1.9 0.0019 E12.5 retina AAAAGACCAA (2) 1.9 0.0019 E12.5 retina GAGGTGGAAT (4) 1.9 0.0019 E14.5 retina GAGTGGATTC (4) 25.5 0.0255 E14.5 retina AAAAGACCAA (2) 1.8 0.0018 E14.5 retina AGAGAGAGAG (8) 1.8 0.0018 E14.5 retina CCTGGCCTTT (5) 1.8 0.0018 E14.5 retina GAGGTGGAAT (4) 1.8 0.0018 E16.5 retina GAGTGGATTC (4) 21.7 0.0217 E16.5 retina AGAGAGAGAG (8) 3.6 0.0036 E16.5 retina GAGGTGGAAT (4) 3.6 0.0036 E16.5 retina ATGTCTAAAA (2) 1.8 0.0018 E18.5 retina GAGTGGATTC (4) 23.6 0.0236 E18.5 retina GAGGTGGAAT (4) 7.3 0.0073 E18.5 retina AGAGAGAGAG (8) 3.6 0.0036 E18.5 retina AAAAAACCAA (2) 1.8 0.0018 E18.5 retina GCCGGGGAAT (2) 1.8 0.0018 P0.5 retina GAGTGGATTC (4) 13.7 0.0137 P0.5 retina AGAGAGAGAG (8) 5.9 0.0059 P0.5 retina GCCGGGGAAT (2) 2 0.002 P0.5 retina GCGGGGATGT (2) 2 0.002 P2.5 retina GAGTGGATTC (4) 21.1 0.0211 P2.5 retina GAGGTGGAAT (4) 7 0.007 P2.5 retina AGAGAGAGAG (8) 1.8 0.0018 P2.5 retina ATGTCTAAAA (2) 1.8 0.0018 P2.5 retina GAGTGGATTT 1.8 0.0018 P2.5 retina GCCGGGGAAT (2) 1.8 0.0018 P4.5 retina GAGTGGATTC (4) 11.9 0.0119 P4.5 retina AGAGAGAGAG (8) 7.9 0.0079 P4.5 retina GAGGTGGAAT (4) 4 0.004 P4.5 retina GCCGGGGAAT (2) 2 0.002 P6.5 retina GAGTGGATTC (4) 18.3 0.0183 P6.5 retina AGAGAGAGAG (8) 5 0.005 P6.5 retina GAGGTGGAAT (4) 5 0.005 P6.5 retina AAAAGACCAA (2) 1.7 0.0017 P10.5 crx- retina GAGTGGATTC (4) 18.6 0.0186 P10.5 crx- retina AGAGAGAGAG (8) 9.3 0.0093 P10.5 crx- retina GAGGTGGAAT (4) 9.3 0.0093 P10.5 crx- retina AAAAGACCAA (2) 3.7 0.0037 P10.5 crx+ retina GAGTGGATTC (4) 23.1 0.0231 P10.5 crx+ retina AGAGAGAGAG (8) 5.8 0.0058 P10.5 crx+ retina GCAAGACAGA (13) 3.8 0.0038 P10.5 crx+ retina GCCAAAGGAA (3) 3.8 0.0038 P10.5 crx+ retina GAGGTGGAAT (4) 1.9 0.0019 Adult retinal AGAGAGAGAG (8) 9.3 0.0093 Adult retinal GAGTGGATTC (4) 7.4 0.0074 Adult retinal CCTGGCCTTT (5) 1.9 0.0019 Adult retinal GCCAAAGGAA (3) 1.9 0.0019 Adult retinal GCCGGGGAAT (2) 1.9 0.0019 Adult retinal GCGGGGATGT (2) 1.9 0.0019 ONL AGAGAGAGAG (8) 7.7 0.0077 ONL GAGTGGATTC (4) 7.7 0.0077 ONL CCTGGCCTTT (5) 1.9 0.0019 ONL GAGTGGGTTC (2) 1.9 0.0019 ONL GCCAAAGGAA (3) 1.9 0.0019