Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27796
5730427N09Rik
RIKEN cDNA 5730427N09 gene
13
59050
Mm.27796
B230112C05Rik
RIKEN cDNA B230112C05 gene
13
320557
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCAGTCATC
(
4
)
14.7
0.0147
P8 Cb GC
TTAATAAAAT
(
12
)
8.2
0.0082
P8 Cb GC
AACGTTCAAA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGCAGTCATC
(
4
)
4.6
0.0046
P8 GC+1d culture
TGCAGTCATC
(
4
)
9.1
0.0091
P8 GC+1d culture
TTAATAAAAT
(
12
)
5.7
0.0057
P8 GC+1d culture
AGAGCATTAA (
8
)
1.1
0.0011
P8 GC+1d culture
ATTAAGCAGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCAGTCATC
(
4
)
18.7
0.0187
P8 GC+SHH+1d culture
TTAATAAAAT
(
12
)
9.4
0.0094
P8 GC+SHH+1d culture
AGAGCATTAA (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TCACACACCC (
9
)
1.2
0.0012
3T3 fibroblasts
TGCAGTCATC
(
4
)
17.5
0.0175
P1 cortex
TGCAGTCATC
(
4
)
4.5
0.0045
P1 cortex
TTAATAAAAT
(
12
)
4.5
0.0045
Hypothalamus
TTAATAAAAT
(
12
)
12.7
0.0127
Hypothalamus
TGCAGTCATC
(
4
)
5.4
0.0054
E12.5 retina
TGCAGTCATC
(
4
)
30
0.03
E12.5 retina
TTAATAAAAT
(
12
)
7.5
0.0075
E12.5 retina
AGAGCATTAA (
8
)
3.8
0.0038
E12.5 retina
TCACACACCC (
9
)
1.9
0.0019
E14.5 retina
TTAATAAAAT
(
12
)
14.6
0.0146
E14.5 retina
TGCAGTCATC
(
4
)
9.1
0.0091
E14.5 retina
TCACACACCC (
9
)
1.8
0.0018
E16.5 retina
TGCAGTCATC
(
4
)
16.3
0.0163
E16.5 retina
TTAATAAAAT
(
12
)
7.2
0.0072
E16.5 retina
AACGTTCAAA
(
3
)
1.8
0.0018
E18.5 retina
TTAATAAAAT
(
12
)
25.5
0.0255
E18.5 retina
TGCAGTCATC
(
4
)
18.2
0.0182
E18.5 retina
AGAGCATTAA (
8
)
3.6
0.0036
E18.5 retina
AACGTTCAAA
(
3
)
1.8
0.0018
P0.5 retina
TGCAGTCATC
(
4
)
11.8
0.0118
P0.5 retina
TTAATAAAAT
(
12
)
3.9
0.0039
P2.5 retina
TGCAGTCATC
(
4
)
24.6
0.0246
P2.5 retina
TTAATAAAAT
(
12
)
8.8
0.0088
P2.5 retina
AACGTTCAAA
(
3
)
1.8
0.0018
P4.5 retina
TGCAGTCATC
(
4
)
21.8
0.0218
P4.5 retina
TTAATAAAAT
(
12
)
17.8
0.0178
P6.5 retina
TGCAGTCATC
(
4
)
11.7
0.0117
P6.5 retina
TTAATAAAAT
(
12
)
6.7
0.0067
P6.5 retina
ATTAAGCAGA
(
3
)
1.7
0.0017
P10.5 crx- retina
TTAATAAAAT
(
12
)
13
0.013
P10.5 crx- retina
TGCAGTCATC
(
4
)
7.4
0.0074
P10.5 crx+ retina
TGCAGTCATC
(
4
)
9.6
0.0096
P10.5 crx+ retina
TTAATAAAAT
(
12
)
3.8
0.0038
Adult retinal
TGCAGTCATC
(
4
)
1.9
0.0019
ONL
TGCAGTCATC
(
4
)
3.8
0.0038
ONL
ATTAAGCAGA
(
3
)
1.9
0.0019
ONL
TTAATAAAAT
(
12
)
1.9
0.0019
