Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277977
Stx16
syntaxin 16
2
228960
Mm.277977
D130084N16Rik
RIKEN cDNA D130084N16 gene
2
403348
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTTCACACA (
4
)
8.2
0.0082
P8 Cb GC
TTAAATAAAT (
6
)
4.9
0.0049
P8 Cb GC
ATAACATTGA (
7
)
1.6
0.0016
Cb medulloblastoma
GTTTCACACA (
4
)
4.6
0.0046
Cb medulloblastoma
ATAACATTGA (
7
)
2.3
0.0023
Cb medulloblastoma
GAGGCGACAA
(
3
)
2.3
0.0023
P8 GC+1d culture
GAGGCGACAA
(
3
)
3.4
0.0034
P8 GC+1d culture
ATAACATTGA (
7
)
2.3
0.0023
P8 GC+1d culture
GTTTCACACA (
4
)
2.3
0.0023
P8 GC+1d culture
TTAAATAAAT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTCACACA (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TTAAATAAAT (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
ATAACATTGA (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGGCGACAA
(
3
)
2.3
0.0023
3T3 fibroblasts
GAGGCGACAA
(
3
)
3.5
0.0035
3T3 fibroblasts
GTTTCACACA (
4
)
3.5
0.0035
E15 cortex
GCCAGCCTGA
(
6
)
4.9
0.0049
E15 cortex
GTTTCACACA (
4
)
4.9
0.0049
Hypothalamus
GAGGCGACAA
(
3
)
3.6
0.0036
Hypothalamus
GTTTCACACA (
4
)
3.6
0.0036
Hypothalamus
TTAAATAAAT (
6
)
3.6
0.0036
E12.5 retina
ATAACATTGA (
7
)
1.9
0.0019
E12.5 retina
GCTTCAAAGA (
4
)
1.9
0.0019
E12.5 retina
GTTTCACACA (
4
)
1.9
0.0019
E12.5 retina
TTAAATAAAT (
6
)
1.9
0.0019
E14.5 retina
GTTTCACACA (
4
)
7.3
0.0073
E14.5 retina
TTAAATAAAT (
6
)
3.6
0.0036
E14.5 retina
GCCAGCCTGA
(
6
)
1.8
0.0018
E16.5 retina
GTTTCACACA (
4
)
3.6
0.0036
E18.5 retina
GTTTCACACA (
4
)
7.3
0.0073
E18.5 retina
TTAAATAAAT (
6
)
3.6
0.0036
P0.5 retina
GTTTCACACA (
4
)
9.8
0.0098
P0.5 retina
GAGGCGACAA
(
3
)
2
0.002
P0.5 retina
TTAAATAAAT (
6
)
2
0.002
P2.5 retina
GTTTCACACA (
4
)
7
0.007
P2.5 retina
TTAAATAAAT (
6
)
5.3
0.0053
P2.5 retina
GAGGCGACAA
(
3
)
1.8
0.0018
P2.5 retina
GCTTCAAAGA (
4
)
1.8
0.0018
P4.5 retina
TTAAATAAAT (
6
)
5.9
0.0059
P4.5 retina
GTTTCACACA (
4
)
4
0.004
P6.5 retina
GTTTCACACA (
4
)
3.3
0.0033
P6.5 retina
TTAAATAAAT (
6
)
3.3
0.0033
P6.5 retina
GAGGCGACAA
(
3
)
1.7
0.0017
P10.5 crx- retina
GTTTCACACA (
4
)
11.1
0.0111
P10.5 crx- retina
GAGGCGACAA
(
3
)
3.7
0.0037
P10.5 crx- retina
ATAACATTGA (
7
)
1.9
0.0019
P10.5 crx- retina
TTAAATAAAT (
6
)
1.9
0.0019
P10.5 crx+ retina
GTTTCACACA (
4
)
3.8
0.0038
P10.5 crx+ retina
TTAAATAAAT (
6
)
3.8
0.0038
P10.5 crx+ retina
GAGGCGACAA
(
3
)
1.9
0.0019
Adult retinal
GTTTCACACA (
4
)
9.3
0.0093
Adult retinal
GAGGCGACAA
(
3
)
5.6
0.0056
Adult retinal
GCCAGCCTGA
(
6
)
1.9
0.0019
Adult retinal
TTAAATAAAT (
6
)
1.9
0.0019
ONL
GTTTCACACA (
4
)
13.4
0.0134
ONL
GCTTCAAAGA (
4
)
7.7
0.0077
ONL
TTAAATAAAT (
6
)
1.9
0.0019
