Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.278031
2900042O04Rik
RIKEN cDNA 2900042O04 gene
1
72928
Mm.278031
1700025G04Rik
RIKEN cDNA 1700025G04 gene
1
69399
Human Homolog
C1orf21[chromosome 1 open reading frame 21]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATGCCTGA
(
2
)
TCCTATGCCC
(
2
)
TCCTTTCCCT
(
3
)
4.8
0.0048
Cb medulloblastoma
AAATGCCTGA
(
2
)
6.9
0.0069
P8 GC+1d culture
GGATGGTGGC
(
5
)
4.6
0.0046
P8 GC+SHH+1d culture
AAATGCCTGA
(
2
)
GGATGGTGGC
(
5
)
TCCTTTCCCT
(
3
)
8.2
0.0082
3T3 fibroblasts
GGATGGTGGC
(
5
)
3.5
0.0035
E15 cortex
AAATGCCTGA
(
2
)
GGATGGTGGC
(
5
)
14.8
0.0148
Hypothalamus
AAATGCCTGA
(
2
)
1.8
0.0018
E14.5 retina
AAATGCCTGA
(
2
)
GGATGGTGGC
(
5
)
TCCTTTCCCT
(
3
)
5.4
0.0054
E16.5 retina
TCCTTTCCCT
(
3
)
1.8
0.0018
E18.5 retina
AAATGCCTGA
(
2
)
GGATGGTGGC
(
5
)
TCCTTTCCCT
(
3
)
7.2
0.0072
P2.5 retina
AAATGCCTGA
(
2
)
1.8
0.0018
P4.5 retina
AAATGCCTGA
(
2
)
TCCTATGCCC
(
2
)
4
0.004
P6.5 retina
AAATGCCTGA
(
2
)
6.7
0.0067
P10.5 crx- retina
TCCTATGCCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAATGCCTGA
(
2
)
1.9
0.0019
