Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278458	Fkbp1a	FK506 binding protein 1a	2		14225
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | FK506 binding | isomerase activity | membrane | peptidyl-prolyl cis-trans isomerase activity | protein folding | transport
Human Homolog	FKBP1A[FK506 binding protein 1A, 12kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 134 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTCTTCCC (4) 16.3 0.0163 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GAGGACTTTG (9) 3.3 0.0033 P8 Cb GC AATCCTGGGG (3) 1.6 0.0016 P8 Cb GC ACACAGAGCT (6) 1.6 0.0016 P8 Cb GC GCGTCCTCAG (2) 1.6 0.0016 P8 Cb GC GGAAGTCTTC (2) 1.6 0.0016 P8 Cb GC GGAGTGCAGG (2) 1.6 0.0016 P8 Cb GC TACTCTTCCC (5) 1.6 0.0016 P8 Cb GC TGGTGGGATG (4) 1.6 0.0016 Cb medulloblastoma TCCTCTTCCC (4) 27.7 0.0277 Cb medulloblastoma ACACAGAGCT (6) 6.9 0.0069 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma GAGGAATCTG (5) 2.3 0.0023 Cb medulloblastoma GGAGTGCAGG (2) 2.3 0.0023 Cb medulloblastoma TGGTGGGATG (4) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TCCTCTTCCC (4) 22.8 0.0228 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture ACACAGAGCT (6) 1.1 0.0011 P8 GC+1d culture CAGATCTCTT 1.1 0.0011 P8 GC+1d culture GAGGACTTTG (9) 1.1 0.0011 P8 GC+1d culture GGGAAGCGGA (3) 1.1 0.0011 P8 GC+1d culture TACTCTTCCC (5) 1.1 0.0011 P8 GC+1d culture TGGTGGGATG (4) 1.1 0.0011 P8 GC+SHH+1d culture TCCTCTTCCC (4) 17.6 0.0176 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAGGACTTTG (9) 3.5 0.0035 P8 GC+SHH+1d culture ACACAGAGCT (6) 1.2 0.0012 P8 GC+SHH+1d culture CAGATCTCTT 1.2 0.0012 P8 GC+SHH+1d culture GCGTCCTCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGTCTTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TACTCTTCCC (5) 1.2 0.0012 3T3 fibroblasts TCCTCTTCCC (4) 17.5 0.0175 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 3T3 fibroblasts TCTCTTCCCC 3.5 0.0035 E15 cortex TCCTCTTCCC (4) 14.8 0.0148 E15 cortex GAGGACTTTG (9) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TCCTCTTCCC (4) 36.4 0.0364 P1 cortex GAAAAATAAT (5) 4.5 0.0045 P1 cortex GAGGACTTTG (9) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TCCTCTTCCC (4) 10.9 0.0109 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TGGTGGGATG (4) 3.6 0.0036 Hypothalamus GAGGAATCTG (5) 1.8 0.0018 Hypothalamus TACTCTTCCC (5) 1.8 0.0018 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina TCCTCTTCCC (4) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TACTCTTCCC (5) 3.8 0.0038 E12.5 retina ACACAGAGCT (6) 1.9 0.0019 E12.5 retina CAGATCTCTT 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TCCTCTTCCC (4) 7.3 0.0073 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina ACACAGAGCT (6) 1.8 0.0018 E14.5 retina GAGGACTTTG (9) 1.8 0.0018 E14.5 retina GCGTCCTCAG (2) 1.8 0.0018 E14.5 retina TACTCTTCCC (5) 1.8 0.0018 E14.5 retina TCTCTTCCCC 1.8 0.0018 E14.5 retina TGGTGGGATG (4) 1.8 0.0018 E16.5 retina TCCTCTTCCC (4) 16.3 0.0163 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GGGAAGACCT (4) 1.8 0.0018 E16.5 retina GGGAAGCGGA (3) 1.8 0.0018 E16.5 retina TACTCTTCCC (5) 1.8 0.0018 E16.5 retina TGGTGGGATG (4) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina TCCTCTTCCC (4) 9.1 0.0091 E18.5 retina TACTCTTCCC (5) 3.6 0.0036 E18.5 retina GGAGTGCAGG (2) 1.8 0.0018 P0.5 retina TCCTCTTCCC (4) 13.7 0.0137 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina GAAAAATAAT (5) 2 0.002 P0.5 retina GAGGACTTTG (9) 2 0.002 P0.5 retina GGAAGTCTTC (2) 2 0.002 P0.5 retina TACTCTTCCC (5) 2 0.002 P0.5 retina TCTCTTCCCC 2 0.002 P0.5 retina TGGTGGGATG (4) 2 0.002 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina TCCTCTTCCC (4) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GGGAAGACCT (4) 3.5 0.0035 P2.5 retina GAGGAATCTG (5) 1.8 0.0018 P2.5 retina TACTCTTCCC (5) 1.8 0.0018 P4.5 retina TCCTCTTCCC (4) 17.8 0.0178 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GCGGCGGCGG (24) 4 0.004 P4.5 retina ACACAGAGCT (6) 2 0.002 P4.5 retina GAGGAATCTG (5) 2 0.002 P4.5 retina GAGGACTTTG (9) 2 0.002 P4.5 retina TACTCTTCCC (5) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TCCTCTTCCC (4) 6.7 0.0067 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina TACTCTTCCC (5) 3.3 0.0033 P6.5 retina CAGATCTCTT 1.7 0.0017 P6.5 retina GCGTCCTCAG (2) 1.7 0.0017 P6.5 retina GGGAAGACCT (4) 1.7 0.0017 P6.5 retina TGGTGGGATG (4) 1.7 0.0017 P10.5 crx- retina ACACAGAGCT (6) 7.4 0.0074 P10.5 crx- retina TCCTCTTCCC (4) 7.4 0.0074 P10.5 crx- retina GAGGACTTTG (9) 3.7 0.0037 P10.5 crx- retina AATCCTGGGG (3) 1.9 0.0019 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx- retina GGGAAGACCT (4) 1.9 0.0019 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina TCCTCTTCCC (4) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAGGAATCTG (5) 1.9 0.0019 P10.5 crx+ retina GAGGACTTTG (9) 1.9 0.0019 P10.5 crx+ retina GCGTCCTCAG (2) 1.9 0.0019 P10.5 crx+ retina TACTCTTCCC (5) 1.9 0.0019 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 Adult retinal TCCTCTTCCC (4) 13 0.013 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GAGGACTTTG (9) 3.7 0.0037 Adult retinal GCGTCCTCAG (2) 3.7 0.0037 Adult retinal ACACAGAGCT (6) 1.9 0.0019 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL GAGGACTTTG (9) 5.7 0.0057 ONL AATCCTGGGG (3) 3.8 0.0038 ONL TCCTCTTCCC (4) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GGGAAGCGGA (3) 1.9 0.0019