Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.278477
1200003C05Rik
RIKEN cDNA 1200003C05 gene
12
104771
Mm.278477
2310047L11Rik
RIKEN cDNA 2310047L11 gene
12
70280
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCAGATTAT
(
2
)
9.8
0.0098
P8 Cb GC
TTTTTGTACA (
7
)
9.8
0.0098
P8 Cb GC
TTCTGATAAT
(
7
)
1.6
0.0016
Cb medulloblastoma
TTCAGATTAT
(
2
)
6.9
0.0069
Cb medulloblastoma
TTTTTGTACA (
7
)
6.9
0.0069
Cb medulloblastoma
AAAGGATGGG (
2
)
2.3
0.0023
P8 GC+1d culture
TTTTTGTACA (
7
)
11.4
0.0114
P8 GC+1d culture
TTCAGATTAT
(
2
)
5.7
0.0057
P8 GC+1d culture
TCTGCTTCTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTGTACA (
7
)
14.1
0.0141
P8 GC+SHH+1d culture
TTCAGATTAT
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
GCCGTGCTCC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGCTTCTG
(
2
)
1.2
0.0012
3T3 fibroblasts
TCTGCTTCTG
(
2
)
3.5
0.0035
3T3 fibroblasts
TTTTTGTACA (
7
)
3.5
0.0035
E15 cortex
CGTCCCCCAC
(
2
)
4.9
0.0049
E15 cortex
TTCTGATAAT
(
7
)
4.9
0.0049
P1 cortex
AAAGGATGGG (
2
)
9.1
0.0091
P1 cortex
TTCAGATTAT
(
2
)
9.1
0.0091
P1 cortex
TCTGCTTCTG
(
2
)
4.5
0.0045
Hypothalamus
CGGACTCGGC
(
7
)
1.8
0.0018
Hypothalamus
TCTGCTTCTG
(
2
)
1.8
0.0018
Hypothalamus
TTCAGATTAT
(
2
)
1.8
0.0018
E12.5 retina
TTCAGATTAT
(
2
)
3.8
0.0038
E12.5 retina
TTTTTGTACA (
7
)
3.8
0.0038
E14.5 retina
TTTTTGTACA (
7
)
27.3
0.0273
E14.5 retina
TTCAGATTAT
(
2
)
5.5
0.0055
E14.5 retina
TTCTGATAAT
(
7
)
1.8
0.0018
E16.5 retina
TTTTTGTACA (
7
)
18.1
0.0181
E16.5 retina
CGTCCCCCAC
(
2
)
1.8
0.0018
E16.5 retina
TCTGCTTCTG
(
2
)
1.8
0.0018
E16.5 retina
TTCAGATTAT
(
2
)
1.8
0.0018
E18.5 retina
TTTTTGTACA (
7
)
12.7
0.0127
E18.5 retina
TTCAGATTAT
(
2
)
5.5
0.0055
E18.5 retina
CGTCCCCCAC
(
2
)
1.8
0.0018
E18.5 retina
GCCGTGCTCC (
3
)
1.8
0.0018
E18.5 retina
TCTGCTTCTG
(
2
)
1.8
0.0018
P0.5 retina
TTTTTGTACA (
7
)
7.9
0.0079
P0.5 retina
TTCAGATTAT
(
2
)
2
0.002
P2.5 retina
TTTTTGTACA (
7
)
22.9
0.0229
P2.5 retina
TTCAGATTAT
(
2
)
8.8
0.0088
P2.5 retina
AGACATTTCA (
7
)
1.8
0.0018
P2.5 retina
TCTGCTTCTG
(
2
)
1.8
0.0018
P4.5 retina
TTCAGATTAT
(
2
)
17.8
0.0178
P4.5 retina
TTTTTGTACA (
7
)
11.9
0.0119
P4.5 retina
AGACATTTCA (
7
)
4
0.004
P4.5 retina
TTCTGATAAT
(
7
)
4
0.004
P4.5 retina
AAAGGATGGG (
2
)
2
0.002
P4.5 retina
CGGACTCGGC
(
7
)
2
0.002
P4.5 retina
GCCGTGCTCC (
3
)
2
0.002
P4.5 retina
TCTGCTTCTG
(
2
)
2
0.002
P6.5 retina
TTCAGATTAT
(
2
)
10
0.01
P6.5 retina
TTTTTGTACA (
7
)
8.3
0.0083
P6.5 retina
TCTGCTTCTG
(
2
)
3.3
0.0033
P6.5 retina
AAAGGATGGG (
2
)
1.7
0.0017
P10.5 crx- retina
TTCAGATTAT
(
2
)
5.6
0.0056
P10.5 crx- retina
TTTTTGTACA (
7
)
3.7
0.0037
P10.5 crx- retina
TCTGCTTCTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTTTTGTACA (
7
)
7.7
0.0077
P10.5 crx+ retina
TTCAGATTAT
(
2
)
5.8
0.0058
P10.5 crx+ retina
AAAGGATGGG (
2
)
1.9
0.0019
Adult retinal
TTTTTGTACA (
7
)
5.6
0.0056
Adult retinal
AAAGGATGGG (
2
)
1.9
0.0019
Adult retinal
CGGACTCGGC
(
7
)
1.9
0.0019
Adult retinal
TTCTGATAAT
(
7
)
1.9
0.0019
ONL
TCTGCTTCTG
(
2
)
1.9
0.0019
ONL
TTTTTGTACA (
7
)
1.9
0.0019
