Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278672	Grin1	glutamate receptor, ionotropic, NMDA1 (zeta 1)	2	2 12.0 cM	14810
Gene Ontology	cytoplasm | extracellular space | glutamate-gated ion channel activity | inotropic glutamate receptor activity | integral to membrane | ion channel activity | ion transport | magnesium ion binding | membrane | membrane fraction | postsynaptic membrane | potassium channel activity | potassium ion transport | protein binding | receptor activity | receptor binding | synaptic transmission | synaptic vesicle | transport | transporter activity
Human Homolog	GRIN1[glutamate receptor, ionotropic, N-methyl D-aspartate 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 17 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma ACTAGCTCTC (2) 2.3 0.0023 P8 GC+1d culture ACTAGCTCTC (2) CTGGTGGCTG (2) 2.2 0.0022 P8 GC+SHH+1d culture ACTAGCTCTC (2) CTGGTGGCTG (2) 3.5 0.0035 3T3 fibroblasts CACCTGCTGA (2) 3.5 0.0035 E15 cortex CTGGTGGCTG (2) 14.8 0.0148 P1 cortex CTGGTGGCTG (2) 4.5 0.0045 Hypothalamus ACTAGCTCTC (2) 3.6 0.0036 E16.5 retina CTGGTGGCTG (2) 5.4 0.0054 E18.5 retina CACCTGCTGA (2) 1.8 0.0018 P4.5 retina ACTAGCTCTC (2) 2 0.002 P6.5 retina CTGGTGGCTG (2) 3.3 0.0033 P10.5 crx+ retina ACTAGCTCTC (2) CTGGTGGCTG (2) 3.8 0.0038 Adult retinal ACTAGCTCTC (2) 1.9 0.0019 ONL CTGGTGGCTG (2) 1.9 0.0019